Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF3Q9NR23 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF3Q9NR23 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GDF3Q9NR23 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
GDF3Q9NR23 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF3Q9NR23 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF3Q9NR23 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GDF3Q9NR23 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDF3Q9NR23 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GDF3Q9NR23 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GDF3Q9NR23 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GDF3Q9NR23 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
GDF3Q9NR23 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GDF3Q9NR23 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.68■□□□□ 0.9
GDF3Q9NR23 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.68■□□□□ 0.9
GDF3Q9NR23 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.68■□□□□ 0.9
GDF3Q9NR23 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.68■□□□□ 0.9
GDF3Q9NR23 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GDF3Q9NR23 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
GDF3Q9NR23 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDF3Q9NR23 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GDF3Q9NR23 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GDF3Q9NR23 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDF3Q9NR23 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.67■□□□□ 0.9
GDF3Q9NR23 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDF3Q9NR23 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GDF3Q9NR23 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.67■□□□□ 0.9
GDF3Q9NR23 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDF3Q9NR23 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
GDF3Q9NR23 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GDF3Q9NR23 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.67■□□□□ 0.9
GDF3Q9NR23 AC091874.3-201ENST00000512672 1195 ntBASIC20.67■□□□□ 0.9
GDF3Q9NR23 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.67■□□□□ 0.9
GDF3Q9NR23 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.67■□□□□ 0.9
GDF3Q9NR23 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
GDF3Q9NR23 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDF3Q9NR23 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.67■□□□□ 0.9
GDF3Q9NR23 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
GDF3Q9NR23 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.67■□□□□ 0.9
GDF3Q9NR23 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDF3Q9NR23 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.67■□□□□ 0.9
GDF3Q9NR23 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.67■□□□□ 0.9
GDF3Q9NR23 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.67■□□□□ 0.9
GDF3Q9NR23 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GDF3Q9NR23 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
GDF3Q9NR23 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
GDF3Q9NR23 DUSP5P2-201ENST00000426873 1033 ntBASIC20.66■□□□□ 0.9
GDF3Q9NR23 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.66■□□□□ 0.9
GDF3Q9NR23 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
GDF3Q9NR23 AC093827.2-201ENST00000512654 315 ntBASIC20.66■□□□□ 0.9
GDF3Q9NR23 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GDF3Q9NR23 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.66■□□□□ 0.9
GDF3Q9NR23 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.66■□□□□ 0.9
GDF3Q9NR23 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.66■□□□□ 0.9
GDF3Q9NR23 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF3Q9NR23 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF3Q9NR23 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GDF3Q9NR23 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF3Q9NR23 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GDF3Q9NR23 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF3Q9NR23 LINC01465-201ENST00000408887 1940 ntBASIC20.66■□□□□ 0.9
GDF3Q9NR23 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GDF3Q9NR23 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF3Q9NR23 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GDF3Q9NR23 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF3Q9NR23 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF3Q9NR23 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF3Q9NR23 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF3Q9NR23 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF3Q9NR23 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDF3Q9NR23 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GDF3Q9NR23 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.65■□□□□ 0.9
GDF3Q9NR23 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
GDF3Q9NR23 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.65■□□□□ 0.9
GDF3Q9NR23 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GDF3Q9NR23 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GDF3Q9NR23 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GDF3Q9NR23 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GDF3Q9NR23 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.65■□□□□ 0.9
GDF3Q9NR23 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.65■□□□□ 0.9
GDF3Q9NR23 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GDF3Q9NR23 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GDF3Q9NR23 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GDF3Q9NR23 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GDF3Q9NR23 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GDF3Q9NR23 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.65■□□□□ 0.9
GDF3Q9NR23 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
GDF3Q9NR23 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
GDF3Q9NR23 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GDF3Q9NR23 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.64■□□□□ 0.9
GDF3Q9NR23 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
GDF3Q9NR23 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.64■□□□□ 0.89
GDF3Q9NR23 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GDF3Q9NR23 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
GDF3Q9NR23 PRORSD1P-201ENST00000295112 541 ntBASIC20.64■□□□□ 0.89
GDF3Q9NR23 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GDF3Q9NR23 AC091799.1-201ENST00000422823 811 ntBASIC20.64■□□□□ 0.89
GDF3Q9NR23 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
GDF3Q9NR23 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
GDF3Q9NR23 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms