Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPS4Q9NQG7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPS4Q9NQG7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.31■□□□□ 0.84
HPS4Q9NQG7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPS4Q9NQG7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 AL445675.2-201ENST00000620291 557 ntBASIC20.3■□□□□ 0.84
HPS4Q9NQG7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 AL031985.4-201ENST00000642138 673 ntBASIC20.3■□□□□ 0.84
HPS4Q9NQG7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 AC018553.1-201ENST00000616682 1458 ntBASIC20.3■□□□□ 0.84
HPS4Q9NQG7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HPS4Q9NQG7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 AC113347.1-201ENST00000413321 391 ntBASIC20.29■□□□□ 0.84
HPS4Q9NQG7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.29■□□□□ 0.84
HPS4Q9NQG7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 KRT18P35-201ENST00000510488 1269 ntBASIC20.29■□□□□ 0.84
HPS4Q9NQG7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS4Q9NQG7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 KRT16P6-202ENST00000425692 1426 ntBASIC20.28■□□□□ 0.84
HPS4Q9NQG7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 YBX1P10-201ENST00000444752 975 ntBASIC20.28■□□□□ 0.84
HPS4Q9NQG7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HPS4Q9NQG7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HPS4Q9NQG7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HPS4Q9NQG7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HPS4Q9NQG7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HPS4Q9NQG7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HPS4Q9NQG7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HPS4Q9NQG7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HPS4Q9NQG7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HPS4Q9NQG7 KRT18P57-201ENST00000443599 1254 ntBASIC20.27■□□□□ 0.84
HPS4Q9NQG7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.27■□□□□ 0.84
HPS4Q9NQG7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
HPS4Q9NQG7 KRT18P16-201ENST00000510337 1294 ntBASIC20.27■□□□□ 0.84
HPS4Q9NQG7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.27■□□□□ 0.84
HPS4Q9NQG7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HPS4Q9NQG7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.27■□□□□ 0.84
HPS4Q9NQG7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HPS4Q9NQG7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HPS4Q9NQG7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
HPS4Q9NQG7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HPS4Q9NQG7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
HPS4Q9NQG7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HPS4Q9NQG7 AC092720.2-201ENST00000602388 1665 ntBASIC20.26■□□□□ 0.83
HPS4Q9NQG7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HPS4Q9NQG7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HPS4Q9NQG7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.26■□□□□ 0.83
HPS4Q9NQG7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.26■□□□□ 0.83
HPS4Q9NQG7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.26■□□□□ 0.83
HPS4Q9NQG7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms