Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.52■□□□□ 0.55
NEUROD4Q9HD90 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 AC091874.3-201ENST00000512672 1195 ntBASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEUROD4Q9HD90 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 FAM201B-201ENST00000458407 597 ntBASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEUROD4Q9HD90 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 GUSBP6-202ENST00000438529 1198 ntBASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 TSPY6P-201ENST00000448518 926 ntBASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 MIR4758-201ENST00000577688 71 ntBASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEUROD4Q9HD90 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEUROD4Q9HD90 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.48■□□□□ 0.55
NEUROD4Q9HD90 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
NEUROD4Q9HD90 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
NEUROD4Q9HD90 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEUROD4Q9HD90 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NEUROD4Q9HD90 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEUROD4Q9HD90 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.48■□□□□ 0.55
NEUROD4Q9HD90 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NEUROD4Q9HD90 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.48■□□□□ 0.55
NEUROD4Q9HD90 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NEUROD4Q9HD90 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms