Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CCDC68Q9H2F9 AC125437.2-201ENST00000625180 2167 ntBASIC19.64■□□□□ 0.74
CCDC68Q9H2F9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.64■□□□□ 0.74
CCDC68Q9H2F9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.64■□□□□ 0.74
CCDC68Q9H2F9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC68Q9H2F9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC68Q9H2F9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 GUSBP6-202ENST00000438529 1198 ntBASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 AC097658.1-201ENST00000475555 843 ntBASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC68Q9H2F9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 AL158211.5-201ENST00000623583 2518 ntBASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 AC005829.2-201ENST00000571422 1056 ntBASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 AL109923.1-201ENST00000618799 583 ntBASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC68Q9H2F9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC68Q9H2F9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms