Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LHX5Q9H2C1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LHX5Q9H2C1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LHX5Q9H2C1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LHX5Q9H2C1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LHX5Q9H2C1 GCSHP5-201ENST00000443090 522 ntBASIC20.74■□□□□ 0.91
LHX5Q9H2C1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LHX5Q9H2C1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.74■□□□□ 0.91
LHX5Q9H2C1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.74■□□□□ 0.91
LHX5Q9H2C1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.74■□□□□ 0.91
LHX5Q9H2C1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LHX5Q9H2C1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.74■□□□□ 0.91
LHX5Q9H2C1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LHX5Q9H2C1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LHX5Q9H2C1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 PRKY-204ENST00000533551 1019 ntBASIC20.73■□□□□ 0.91
LHX5Q9H2C1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.73■□□□□ 0.91
LHX5Q9H2C1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LHX5Q9H2C1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LHX5Q9H2C1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.72■□□□□ 0.91
LHX5Q9H2C1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LHX5Q9H2C1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LHX5Q9H2C1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.72■□□□□ 0.91
LHX5Q9H2C1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.72■□□□□ 0.91
LHX5Q9H2C1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.72■□□□□ 0.91
LHX5Q9H2C1 KRT18P16-201ENST00000510337 1294 ntBASIC20.72■□□□□ 0.91
LHX5Q9H2C1 AC142381.4-202ENST00000563973 229 ntBASIC20.72■□□□□ 0.91
LHX5Q9H2C1 AC233263.1-201ENST00000578059 224 ntBASIC20.72■□□□□ 0.91
LHX5Q9H2C1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.72■□□□□ 0.91
LHX5Q9H2C1 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.72■□□□□ 0.91
LHX5Q9H2C1 AC073648.6-201ENST00000641589 218 ntBASIC20.72■□□□□ 0.91
LHX5Q9H2C1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.72■□□□□ 0.91
LHX5Q9H2C1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LHX5Q9H2C1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LHX5Q9H2C1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LHX5Q9H2C1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LHX5Q9H2C1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LHX5Q9H2C1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LHX5Q9H2C1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 AL158047.1-201ENST00000445918 881 ntBASIC20.71■□□□□ 0.91
LHX5Q9H2C1 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LHX5Q9H2C1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
LHX5Q9H2C1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 AP006294.2-201ENST00000641667 209 ntBASIC20.7■□□□□ 0.9
LHX5Q9H2C1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.7■□□□□ 0.9
LHX5Q9H2C1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LHX5Q9H2C1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LHX5Q9H2C1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LHX5Q9H2C1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms