Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AP001271.2-201ENST00000624018 1556 ntBASIC20.37■□□□□ 0.85
RNF38Q9H0F5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF38Q9H0F5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF38Q9H0F5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF38Q9H0F5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 AC004980.1-204ENST00000429707 299 ntBASIC20.36■□□□□ 0.85
RNF38Q9H0F5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF38Q9H0F5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 MIR1238-201ENST00000408483 83 ntBASIC20.35■□□□□ 0.85
RNF38Q9H0F5 AL390955.1-201ENST00000428694 934 ntBASIC20.35■□□□□ 0.85
RNF38Q9H0F5 AC011506.1-201ENST00000474329 610 ntBASIC20.35■□□□□ 0.85
RNF38Q9H0F5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 LINC01006-201ENST00000333319 2292 ntBASIC20.35■□□□□ 0.85
RNF38Q9H0F5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF38Q9H0F5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 HLA-A-209ENST00000638375 975 ntBASIC20.34■□□□□ 0.85
RNF38Q9H0F5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF38Q9H0F5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF38Q9H0F5 AC099778.1-201ENST00000568593 1911 ntBASIC20.33■□□□□ 0.85
RNF38Q9H0F5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF38Q9H0F5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF38Q9H0F5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF38Q9H0F5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF38Q9H0F5 FAM210CP-201ENST00000445714 574 ntBASIC20.33■□□□□ 0.85
RNF38Q9H0F5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF38Q9H0F5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.33■□□□□ 0.85
RNF38Q9H0F5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF38Q9H0F5 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.33■□□□□ 0.84
RNF38Q9H0F5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF38Q9H0F5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.33■□□□□ 0.84
RNF38Q9H0F5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 CYP2D8P-201ENST00000433633 1490 ntBASIC20.32■□□□□ 0.84
RNF38Q9H0F5 FSCN1P1-201ENST00000568912 1481 ntBASIC20.32■□□□□ 0.84
RNF38Q9H0F5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF38Q9H0F5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms