Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.34■■□□□ 1.33
NBPF3Q9H094 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.34■■□□□ 1.33
NBPF3Q9H094 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.34■■□□□ 1.33
NBPF3Q9H094 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
NBPF3Q9H094 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NBPF3Q9H094 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.34■■□□□ 1.33
NBPF3Q9H094 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.34■■□□□ 1.33
NBPF3Q9H094 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NBPF3Q9H094 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NBPF3Q9H094 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NBPF3Q9H094 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NBPF3Q9H094 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.33■■□□□ 1.33
NBPF3Q9H094 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NBPF3Q9H094 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.33■■□□□ 1.33
NBPF3Q9H094 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.33■■□□□ 1.33
NBPF3Q9H094 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.33■■□□□ 1.33
NBPF3Q9H094 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
NBPF3Q9H094 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.33■■□□□ 1.33
NBPF3Q9H094 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
NBPF3Q9H094 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.33■■□□□ 1.33
NBPF3Q9H094 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NBPF3Q9H094 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
NBPF3Q9H094 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
NBPF3Q9H094 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
NBPF3Q9H094 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NBPF3Q9H094 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.33■■□□□ 1.33
NBPF3Q9H094 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.33■■□□□ 1.33
NBPF3Q9H094 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.33■■□□□ 1.33
NBPF3Q9H094 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NBPF3Q9H094 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.33■■□□□ 1.33
NBPF3Q9H094 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC23.33■■□□□ 1.33
NBPF3Q9H094 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.33■■□□□ 1.33
NBPF3Q9H094 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.33■■□□□ 1.33
NBPF3Q9H094 AP001412.1-201ENST00000608405 714 ntBASIC23.33■■□□□ 1.33
NBPF3Q9H094 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
NBPF3Q9H094 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
NBPF3Q9H094 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
NBPF3Q9H094 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
NBPF3Q9H094 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NBPF3Q9H094 NBPF21P-201ENST00000425093 1451 ntBASIC23.32■■□□□ 1.32
NBPF3Q9H094 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
NBPF3Q9H094 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NBPF3Q9H094 AC087499.1-201ENST00000418141 1075 ntBASIC23.32■■□□□ 1.32
NBPF3Q9H094 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.32■■□□□ 1.32
NBPF3Q9H094 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
NBPF3Q9H094 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.32■■□□□ 1.32
NBPF3Q9H094 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.32■■□□□ 1.32
NBPF3Q9H094 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
NBPF3Q9H094 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.32■■□□□ 1.32
NBPF3Q9H094 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NBPF3Q9H094 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
NBPF3Q9H094 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
NBPF3Q9H094 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NBPF3Q9H094 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NBPF3Q9H094 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
NBPF3Q9H094 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
NBPF3Q9H094 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
NBPF3Q9H094 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NBPF3Q9H094 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NBPF3Q9H094 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
NBPF3Q9H094 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NBPF3Q9H094 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NBPF3Q9H094 RCN1P1-201ENST00000400413 996 ntBASIC23.31■■□□□ 1.32
NBPF3Q9H094 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NBPF3Q9H094 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NBPF3Q9H094 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.31■■□□□ 1.32
NBPF3Q9H094 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.31■■□□□ 1.32
NBPF3Q9H094 AC097493.4-201ENST00000641197 219 ntBASIC23.31■■□□□ 1.32
NBPF3Q9H094 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NBPF3Q9H094 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NBPF3Q9H094 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
NBPF3Q9H094 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.31■■□□□ 1.32
NBPF3Q9H094 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NBPF3Q9H094 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
NBPF3Q9H094 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
NBPF3Q9H094 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.3■■□□□ 1.32
NBPF3Q9H094 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.3■■□□□ 1.32
NBPF3Q9H094 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.3■■□□□ 1.32
NBPF3Q9H094 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
NBPF3Q9H094 AP006587.1-201ENST00000534129 1502 ntBASIC23.3■■□□□ 1.32
NBPF3Q9H094 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
NBPF3Q9H094 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NBPF3Q9H094 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NBPF3Q9H094 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NBPF3Q9H094 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NBPF3Q9H094 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC23.3■■□□□ 1.32
NBPF3Q9H094 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.3■■□□□ 1.32
NBPF3Q9H094 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.3■■□□□ 1.32
NBPF3Q9H094 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NBPF3Q9H094 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.3■■□□□ 1.32
NBPF3Q9H094 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.3■■□□□ 1.32
NBPF3Q9H094 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.3■■□□□ 1.32
NBPF3Q9H094 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.3■■□□□ 1.32
NBPF3Q9H094 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.3■■□□□ 1.32
NBPF3Q9H094 AL049637.2-201ENST00000641778 930 ntBASIC23.3■■□□□ 1.32
NBPF3Q9H094 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NBPF3Q9H094 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NBPF3Q9H094 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NBPF3Q9H094 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NBPF3Q9H094 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms