Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM2Q9C040 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM2Q9C040 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM2Q9C040 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.04■□□□□ 0.48
TRIM2Q9C040 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM2Q9C040 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.04■□□□□ 0.48
TRIM2Q9C040 AC098934.4-201ENST00000564127 592 ntBASIC18.04■□□□□ 0.48
TRIM2Q9C040 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM2Q9C040 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRIM2Q9C040 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM2Q9C040 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM2Q9C040 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRIM2Q9C040 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
TRIM2Q9C040 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM2Q9C040 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM2Q9C040 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM2Q9C040 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TRIM2Q9C040 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRIM2Q9C040 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM2Q9C040 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM2Q9C040 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRIM2Q9C040 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM2Q9C040 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TRIM2Q9C040 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM2Q9C040 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM2Q9C040 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM2Q9C040 DUSP5P2-201ENST00000426873 1033 ntBASIC18.03■□□□□ 0.48
TRIM2Q9C040 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM2Q9C040 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRIM2Q9C040 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM2Q9C040 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM2Q9C040 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM2Q9C040 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM2Q9C040 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM2Q9C040 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM2Q9C040 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.03■□□□□ 0.48
TRIM2Q9C040 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TRIM2Q9C040 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
TRIM2Q9C040 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM2Q9C040 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM2Q9C040 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRIM2Q9C040 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM2Q9C040 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM2Q9C040 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM2Q9C040 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM2Q9C040 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM2Q9C040 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM2Q9C040 AC018553.1-201ENST00000616682 1458 ntBASIC18.02■□□□□ 0.48
TRIM2Q9C040 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM2Q9C040 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM2Q9C040 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TRIM2Q9C040 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM2Q9C040 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM2Q9C040 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM2Q9C040 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM2Q9C040 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TRIM2Q9C040 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TRIM2Q9C040 AC005829.2-201ENST00000571422 1056 ntBASIC18.02■□□□□ 0.48
TRIM2Q9C040 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM2Q9C040 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM2Q9C040 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM2Q9C040 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM2Q9C040 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.02■□□□□ 0.47
TRIM2Q9C040 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM2Q9C040 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.02■□□□□ 0.47
TRIM2Q9C040 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.02■□□□□ 0.47
TRIM2Q9C040 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM2Q9C040 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM2Q9C040 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM2Q9C040 AC116351.2-201ENST00000606540 1585 ntBASIC18.01■□□□□ 0.47
TRIM2Q9C040 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM2Q9C040 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
TRIM2Q9C040 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM2Q9C040 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM2Q9C040 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM2Q9C040 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM2Q9C040 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM2Q9C040 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.01■□□□□ 0.47
TRIM2Q9C040 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM2Q9C040 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM2Q9C040 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TRIM2Q9C040 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM2Q9C040 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM2Q9C040 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
TRIM2Q9C040 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM2Q9C040 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM2Q9C040 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM2Q9C040 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM2Q9C040 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM2Q9C040 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM2Q9C040 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM2Q9C040 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM2Q9C040 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM2Q9C040 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM2Q9C040 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18■□□□□ 0.47
TRIM2Q9C040 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18■□□□□ 0.47
TRIM2Q9C040 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM2Q9C040 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18■□□□□ 0.47
TRIM2Q9C040 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18■□□□□ 0.47
TRIM2Q9C040 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms