Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 AC141257.4-201ENST00000634557 245 ntBASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 AC136944.6-201ENST00000634818 245 ntBASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 AP000550.4-202ENST00000639755 178 ntBASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTFDC1Q9BY42 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
RTFDC1Q9BY42 CD70-202ENST00000423145 881 ntTSL 2 BASIC23.94■■□□□ 1.42
RTFDC1Q9BY42 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC23.94■■□□□ 1.42
RTFDC1Q9BY42 METTL23-204ENST00000586752 904 ntTSL 2 BASIC23.94■■□□□ 1.42
RTFDC1Q9BY42 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RTFDC1Q9BY42 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 AC009947.2-201ENST00000444014 672 ntBASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 AC011558.1-201ENST00000623459 338 ntBASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.93■■□□□ 1.42
RTFDC1Q9BY42 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 TOLLIP-AS1-201ENST00000530897 939 ntBASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 DBP-204ENST00000599385 709 ntTSL 3 BASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 TMEM179-206ENST00000616017 1645 ntBASIC23.92■■□□□ 1.42
RTFDC1Q9BY42 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 TSPY17P-201ENST00000450329 467 ntBASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 FAM86EP-206ENST00000510506 987 ntBASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 AL353719.1-201ENST00000566847 864 ntBASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 AL121956.5-201ENST00000625261 221 ntBASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.91■■□□□ 1.42
RTFDC1Q9BY42 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.9■■□□□ 1.42
RTFDC1Q9BY42 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.42
RTFDC1Q9BY42 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
RTFDC1Q9BY42 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.89■■□□□ 1.42
RTFDC1Q9BY42 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RTFDC1Q9BY42 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC23.89■■□□□ 1.41
RTFDC1Q9BY42 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.89■■□□□ 1.41
RTFDC1Q9BY42 GXYLT1P6-201ENST00000456472 1187 ntBASIC23.89■■□□□ 1.41
RTFDC1Q9BY42 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms