Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC13.07□□□□□ -0.32
LITAFQ99732 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.07□□□□□ -0.32
LITAFQ99732 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC13.07□□□□□ -0.32
LITAFQ99732 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 SF1-220ENST00000626028 704 ntTSL 2 BASIC13.07□□□□□ -0.32
LITAFQ99732 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.07□□□□□ -0.32
LITAFQ99732 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.07□□□□□ -0.32
LITAFQ99732 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.07□□□□□ -0.32
LITAFQ99732 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LITAFQ99732 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC13.07□□□□□ -0.32
LITAFQ99732 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 AL512353.2-201ENST00000448759 1962 ntBASIC13.07□□□□□ -0.32
LITAFQ99732 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.07□□□□□ -0.32
LITAFQ99732 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
LITAFQ99732 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LITAFQ99732 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LITAFQ99732 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LITAFQ99732 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LITAFQ99732 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LITAFQ99732 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LITAFQ99732 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.06□□□□□ -0.32
LITAFQ99732 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LITAFQ99732 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LITAFQ99732 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LITAFQ99732 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
LITAFQ99732 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.06□□□□□ -0.32
LITAFQ99732 PRORSD1P-202ENST00000563365 2154 ntBASIC13.06□□□□□ -0.32
LITAFQ99732 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LITAFQ99732 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LITAFQ99732 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LITAFQ99732 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LITAFQ99732 BX842568.3-201ENST00000418104 571 ntBASIC13.06□□□□□ -0.32
LITAFQ99732 IGHV3-19-201ENST00000521488 291 ntBASIC13.06□□□□□ -0.32
LITAFQ99732 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC13.06□□□□□ -0.32
LITAFQ99732 AC105233.4-201ENST00000642045 216 ntBASIC13.06□□□□□ -0.32
LITAFQ99732 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LITAFQ99732 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LITAFQ99732 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LITAFQ99732 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.06□□□□□ -0.32
LITAFQ99732 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LITAFQ99732 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.06□□□□□ -0.32
LITAFQ99732 PTBP1P-201ENST00000554374 1601 ntBASIC13.06□□□□□ -0.32
LITAFQ99732 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.06□□□□□ -0.32
LITAFQ99732 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 ABALON-201ENST00000629058 1903 ntBASIC13.05□□□□□ -0.32
LITAFQ99732 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
LITAFQ99732 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LITAFQ99732 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.05□□□□□ -0.32
LITAFQ99732 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LITAFQ99732 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.05□□□□□ -0.32
LITAFQ99732 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 KRT16P3-201ENST00000439127 1283 ntBASIC13.05□□□□□ -0.32
LITAFQ99732 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC13.05□□□□□ -0.32
LITAFQ99732 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.05□□□□□ -0.32
LITAFQ99732 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.05□□□□□ -0.32
LITAFQ99732 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.05□□□□□ -0.32
LITAFQ99732 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
LITAFQ99732 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
LITAFQ99732 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
LITAFQ99732 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.05□□□□□ -0.32
LITAFQ99732 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
LITAFQ99732 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.05□□□□□ -0.32
LITAFQ99732 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LITAFQ99732 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LITAFQ99732 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.04□□□□□ -0.32
LITAFQ99732 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LITAFQ99732 AC020763.4-201ENST00000623414 4170 ntBASIC13.04□□□□□ -0.32
LITAFQ99732 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
LITAFQ99732 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LITAFQ99732 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LITAFQ99732 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.04□□□□□ -0.32
LITAFQ99732 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms