Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40CQ96S21 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RAB40CQ96S21 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
RAB40CQ96S21 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40CQ96S21 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RAB40CQ96S21 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RAB40CQ96S21 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40CQ96S21 CROCCP3-202ENST00000420820 1947 ntBASIC15.9■□□□□ 0.14
RAB40CQ96S21 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40CQ96S21 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40CQ96S21 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40CQ96S21 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40CQ96S21 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40CQ96S21 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB40CQ96S21 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RAB40CQ96S21 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB40CQ96S21 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.9■□□□□ 0.14
RAB40CQ96S21 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.9■□□□□ 0.14
RAB40CQ96S21 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB40CQ96S21 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RAB40CQ96S21 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40CQ96S21 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40CQ96S21 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
RAB40CQ96S21 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40CQ96S21 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40CQ96S21 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RAB40CQ96S21 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RAB40CQ96S21 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
RAB40CQ96S21 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RAB40CQ96S21 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RAB40CQ96S21 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
RAB40CQ96S21 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.89■□□□□ 0.13
RAB40CQ96S21 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB40CQ96S21 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB40CQ96S21 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RAB40CQ96S21 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.89■□□□□ 0.13
RAB40CQ96S21 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RAB40CQ96S21 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RAB40CQ96S21 PTBP1P-201ENST00000554374 1601 ntBASIC15.89■□□□□ 0.13
RAB40CQ96S21 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.89■□□□□ 0.13
RAB40CQ96S21 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40CQ96S21 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40CQ96S21 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RAB40CQ96S21 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40CQ96S21 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RAB40CQ96S21 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RAB40CQ96S21 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40CQ96S21 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.88■□□□□ 0.13
RAB40CQ96S21 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.88■□□□□ 0.13
RAB40CQ96S21 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
RAB40CQ96S21 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40CQ96S21 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40CQ96S21 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RAB40CQ96S21 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RAB40CQ96S21 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.88■□□□□ 0.13
RAB40CQ96S21 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.88■□□□□ 0.13
RAB40CQ96S21 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.88■□□□□ 0.13
RAB40CQ96S21 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.88■□□□□ 0.13
RAB40CQ96S21 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.88■□□□□ 0.13
RAB40CQ96S21 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.88■□□□□ 0.13
RAB40CQ96S21 AL031963.3-201ENST00000606441 850 ntBASIC15.88■□□□□ 0.13
RAB40CQ96S21 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40CQ96S21 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40CQ96S21 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40CQ96S21 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.88■□□□□ 0.13
RAB40CQ96S21 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40CQ96S21 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40CQ96S21 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40CQ96S21 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40CQ96S21 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40CQ96S21 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40CQ96S21 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.88■□□□□ 0.13
RAB40CQ96S21 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40CQ96S21 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RAB40CQ96S21 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.87■□□□□ 0.13
RAB40CQ96S21 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms