Protein–RNA interactions for Protein: Q96RJ6

FERD3L, Fer3-like protein, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FERD3LQ96RJ6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FERD3LQ96RJ6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.17■□□□□ 0.66
FERD3LQ96RJ6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FERD3LQ96RJ6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
FERD3LQ96RJ6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FERD3LQ96RJ6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FERD3LQ96RJ6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.17■□□□□ 0.66
FERD3LQ96RJ6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.17■□□□□ 0.66
FERD3LQ96RJ6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.17■□□□□ 0.66
FERD3LQ96RJ6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.17■□□□□ 0.66
FERD3LQ96RJ6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.17■□□□□ 0.66
FERD3LQ96RJ6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FERD3LQ96RJ6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
FERD3LQ96RJ6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 AC066615.1-201ENST00000640911 628 ntBASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
FERD3LQ96RJ6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 PCDHAC2-203ENST00000615316 3011 ntBASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 KRT16P5-201ENST00000455284 522 ntBASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
FERD3LQ96RJ6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
FERD3LQ96RJ6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
FERD3LQ96RJ6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
FERD3LQ96RJ6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.14■□□□□ 0.66
FERD3LQ96RJ6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
FERD3LQ96RJ6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 YBX1P10-201ENST00000444752 975 ntBASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 AC009237.14-201ENST00000609975 1594 ntBASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
FERD3LQ96RJ6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FERD3LQ96RJ6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FERD3LQ96RJ6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms