Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNTNAP3BQ96NU0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 AL590627.1-203ENST00000421194 1026 ntBASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3BQ96NU0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 AP002469.2-201ENST00000531724 424 ntBASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3BQ96NU0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 AL356652.1-201ENST00000615962 565 ntBASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3BQ96NU0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 AL732292.2-201ENST00000609649 430 ntBASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.73■□□□□ 0.59
CNTNAP3BQ96NU0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNTNAP3BQ96NU0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms