Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC00479Q96M42 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC00479Q96M42 CCDC92B-201ENST00000575506 885 ntBASIC14.98□□□□□ -0.01
LINC00479Q96M42 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.98□□□□□ -0.01
LINC00479Q96M42 AC131212.1-201ENST00000613771 668 ntBASIC14.98□□□□□ -0.01
LINC00479Q96M42 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LINC00479Q96M42 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC00479Q96M42 PTBP1P-201ENST00000554374 1601 ntBASIC14.98□□□□□ -0.01
LINC00479Q96M42 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
LINC00479Q96M42 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
LINC00479Q96M42 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LINC00479Q96M42 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC00479Q96M42 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LINC00479Q96M42 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LINC00479Q96M42 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.97□□□□□ -0.01
LINC00479Q96M42 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.97□□□□□ -0.01
LINC00479Q96M42 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LINC00479Q96M42 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00479Q96M42 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00479Q96M42 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00479Q96M42 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
LINC00479Q96M42 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00479Q96M42 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LINC00479Q96M42 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LINC00479Q96M42 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LINC00479Q96M42 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00479Q96M42 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00479Q96M42 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00479Q96M42 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC00479Q96M42 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00479Q96M42 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC00479Q96M42 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00479Q96M42 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LINC00479Q96M42 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LINC00479Q96M42 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00479Q96M42 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00479Q96M42 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.96□□□□□ -0.01
LINC00479Q96M42 KRT8P17-201ENST00000453110 1448 ntBASIC14.96□□□□□ -0.01
LINC00479Q96M42 CDV3P1-201ENST00000471403 739 ntBASIC14.96□□□□□ -0.01
LINC00479Q96M42 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC00479Q96M42 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LINC00479Q96M42 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC00479Q96M42 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00479Q96M42 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC00479Q96M42 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.96□□□□□ -0.02
LINC00479Q96M42 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00479Q96M42 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00479Q96M42 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00479Q96M42 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00479Q96M42 AL161938.1-201ENST00000569833 2180 ntBASIC14.95□□□□□ -0.02
LINC00479Q96M42 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00479Q96M42 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00479Q96M42 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00479Q96M42 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00479Q96M42 PGM5P4-201ENST00000421970 445 ntBASIC14.95□□□□□ -0.02
LINC00479Q96M42 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 KRT18P20-201ENST00000548986 1279 ntBASIC14.95□□□□□ -0.02
LINC00479Q96M42 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00479Q96M42 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC00479Q96M42 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms