Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX27Q96L92 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX27Q96L92 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.22■□□□□ 0.99
SNX27Q96L92 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX27Q96L92 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.22■□□□□ 0.99
SNX27Q96L92 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.22■□□□□ 0.99
SNX27Q96L92 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNX27Q96L92 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX27Q96L92 KSR1P1-201ENST00000446298 240 ntBASIC21.22■□□□□ 0.99
SNX27Q96L92 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.22■□□□□ 0.99
SNX27Q96L92 AL049597.2-201ENST00000565575 961 ntBASIC21.22■□□□□ 0.99
SNX27Q96L92 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SNX27Q96L92 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX27Q96L92 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX27Q96L92 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNX27Q96L92 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.22■□□□□ 0.99
SNX27Q96L92 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX27Q96L92 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNX27Q96L92 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.21■□□□□ 0.99
SNX27Q96L92 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNX27Q96L92 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNX27Q96L92 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SNX27Q96L92 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNX27Q96L92 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNX27Q96L92 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNX27Q96L92 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNX27Q96L92 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.21■□□□□ 0.99
SNX27Q96L92 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
SNX27Q96L92 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNX27Q96L92 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.21■□□□□ 0.99
SNX27Q96L92 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SNX27Q96L92 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.21■□□□□ 0.99
SNX27Q96L92 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SNX27Q96L92 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNX27Q96L92 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.2■□□□□ 0.98
SNX27Q96L92 TCF3P1-201ENST00000423021 1937 ntBASIC21.2■□□□□ 0.98
SNX27Q96L92 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNX27Q96L92 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SNX27Q96L92 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.2■□□□□ 0.98
SNX27Q96L92 TSPY15P-201ENST00000457163 923 ntBASIC21.2■□□□□ 0.98
SNX27Q96L92 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNX27Q96L92 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.2■□□□□ 0.98
SNX27Q96L92 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SNX27Q96L92 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SNX27Q96L92 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNX27Q96L92 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.2■□□□□ 0.98
SNX27Q96L92 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX27Q96L92 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SNX27Q96L92 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.19■□□□□ 0.98
SNX27Q96L92 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.19■□□□□ 0.98
SNX27Q96L92 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX27Q96L92 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX27Q96L92 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX27Q96L92 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SNX27Q96L92 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SNX27Q96L92 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.19■□□□□ 0.98
SNX27Q96L92 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.19■□□□□ 0.98
SNX27Q96L92 AL355075.4-201ENST00000554988 638 ntBASIC21.19■□□□□ 0.98
SNX27Q96L92 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.19■□□□□ 0.98
SNX27Q96L92 AP003071.4-201ENST00000562276 1284 ntBASIC21.19■□□□□ 0.98
SNX27Q96L92 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX27Q96L92 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.19■□□□□ 0.98
SNX27Q96L92 AL445675.2-201ENST00000620291 557 ntBASIC21.19■□□□□ 0.98
SNX27Q96L92 CR392000.1-201ENST00000624770 1228 ntBASIC21.19■□□□□ 0.98
SNX27Q96L92 AC097493.4-201ENST00000641197 219 ntBASIC21.19■□□□□ 0.98
SNX27Q96L92 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNX27Q96L92 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.19■□□□□ 0.98
SNX27Q96L92 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX27Q96L92 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX27Q96L92 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX27Q96L92 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNX27Q96L92 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
SNX27Q96L92 KRT16P1-201ENST00000399124 1418 ntBASIC21.19■□□□□ 0.98
SNX27Q96L92 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNX27Q96L92 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNX27Q96L92 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SNX27Q96L92 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.19■□□□□ 0.98
SNX27Q96L92 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX27Q96L92 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.19■□□□□ 0.98
SNX27Q96L92 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNX27Q96L92 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SNX27Q96L92 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNX27Q96L92 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNX27Q96L92 LINC01521-201ENST00000504184 1943 ntBASIC21.18■□□□□ 0.98
SNX27Q96L92 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.18■□□□□ 0.98
SNX27Q96L92 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX27Q96L92 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNX27Q96L92 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SNX27Q96L92 AL355355.2-201ENST00000442321 338 ntBASIC21.18■□□□□ 0.98
SNX27Q96L92 NUDT16P1-203ENST00000513809 620 ntBASIC21.18■□□□□ 0.98
SNX27Q96L92 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.18■□□□□ 0.98
SNX27Q96L92 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.18■□□□□ 0.98
SNX27Q96L92 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.18■□□□□ 0.98
SNX27Q96L92 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.18■□□□□ 0.98
SNX27Q96L92 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.18■□□□□ 0.98
SNX27Q96L92 RN7SL850P-201ENST00000579959 291 ntBASIC21.18■□□□□ 0.98
SNX27Q96L92 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SNX27Q96L92 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.18■□□□□ 0.98
SNX27Q96L92 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.18■□□□□ 0.98
SNX27Q96L92 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms