Protein–RNA interactions for Protein: Q96JQ0

DCHS1, Protocadherin-16, humanhuman

Predictions only

Length 3,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS1Q96JQ0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DCHS1Q96JQ0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.88■□□□□ 0.61
DCHS1Q96JQ0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DCHS1Q96JQ0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.88■□□□□ 0.61
DCHS1Q96JQ0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.88■□□□□ 0.61
DCHS1Q96JQ0 AC080038.3-201ENST00000623346 1952 ntBASIC18.88■□□□□ 0.61
DCHS1Q96JQ0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.88■□□□□ 0.61
DCHS1Q96JQ0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.88■□□□□ 0.61
DCHS1Q96JQ0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DCHS1Q96JQ0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DCHS1Q96JQ0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 POLD2P1-201ENST00000511220 997 ntBASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 AC011298.2-201ENST00000617989 482 ntBASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 TSSC2-201ENST00000450217 709 ntBASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 AC012615.1-201ENST00000565797 1299 ntBASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.87■□□□□ 0.61
DCHS1Q96JQ0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 AP001160.2-201ENST00000596071 487 ntBASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 AL121672.3-201ENST00000608644 468 ntBASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 AC243591.1-201ENST00000452967 1364 ntBASIC18.86■□□□□ 0.61
DCHS1Q96JQ0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 AC092597.1-201ENST00000487352 616 ntBASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 C9orf163-202ENST00000624034 2573 ntBASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.85■□□□□ 0.61
DCHS1Q96JQ0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 PGAM5P1-201ENST00000518923 814 ntBASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DCHS1Q96JQ0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms