Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCD1Q96GM5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SMARCD1Q96GM5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCD1Q96GM5 MIR4497-201ENST00000583208 89 ntBASIC20.69■□□□□ 0.9
SMARCD1Q96GM5 AC073195.1-201ENST00000607241 877 ntBASIC20.69■□□□□ 0.9
SMARCD1Q96GM5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SMARCD1Q96GM5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SMARCD1Q96GM5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCD1Q96GM5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCD1Q96GM5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
SMARCD1Q96GM5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCD1Q96GM5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCD1Q96GM5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCD1Q96GM5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCD1Q96GM5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 NIFKP9-201ENST00000419265 221 ntBASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SMARCD1Q96GM5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 KRT8P8-201ENST00000434750 1448 ntBASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCD1Q96GM5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 KSR1P1-201ENST00000446298 240 ntBASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 CD177P1-201ENST00000606252 935 ntBASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.66■□□□□ 0.9
SMARCD1Q96GM5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCD1Q96GM5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCD1Q96GM5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCD1Q96GM5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SMARCD1Q96GM5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCD1Q96GM5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCD1Q96GM5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.65■□□□□ 0.9
SMARCD1Q96GM5 TSPY7P-201ENST00000431358 1114 ntBASIC20.65■□□□□ 0.9
SMARCD1Q96GM5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCD1Q96GM5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.65■□□□□ 0.9
SMARCD1Q96GM5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms