Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 AC105265.2-201ENST00000467189 838 ntBASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 AP000997.3-201ENST00000623333 2250 ntBASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 AC012414.1-201ENST00000556676 535 ntBASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 MIR6084-201ENST00000622012 110 ntBASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP6Q96FZ7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 AC090164.3-201ENST00000610780 2143 ntBASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP6Q96FZ7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 AL354811.1-201ENST00000610286 706 ntBASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP6Q96FZ7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 IRS3P-201ENST00000223076 1006 ntBASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 MIR638-201ENST00000385237 100 ntBASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms