Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.77■□□□□ 0.91
TRIM11Q96F44 BX323043.1-201ENST00000641006 1765 ntBASIC20.77■□□□□ 0.91
TRIM11Q96F44 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM11Q96F44 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM11Q96F44 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.76■□□□□ 0.91
TRIM11Q96F44 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM11Q96F44 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRIM11Q96F44 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM11Q96F44 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRIM11Q96F44 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.76■□□□□ 0.91
TRIM11Q96F44 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM11Q96F44 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRIM11Q96F44 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
TRIM11Q96F44 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM11Q96F44 MYC-209ENST00000641252 345 ntBASIC20.76■□□□□ 0.91
TRIM11Q96F44 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRIM11Q96F44 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM11Q96F44 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRIM11Q96F44 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM11Q96F44 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRIM11Q96F44 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TRIM11Q96F44 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM11Q96F44 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM11Q96F44 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.75■□□□□ 0.91
TRIM11Q96F44 Z82202.1-201ENST00000623446 1880 ntBASIC20.75■□□□□ 0.91
TRIM11Q96F44 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM11Q96F44 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM11Q96F44 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRIM11Q96F44 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM11Q96F44 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TRIM11Q96F44 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM11Q96F44 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.75■□□□□ 0.91
TRIM11Q96F44 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM11Q96F44 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM11Q96F44 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRIM11Q96F44 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRIM11Q96F44 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM11Q96F44 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM11Q96F44 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TRIM11Q96F44 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM11Q96F44 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
TRIM11Q96F44 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM11Q96F44 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM11Q96F44 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRIM11Q96F44 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM11Q96F44 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
TRIM11Q96F44 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.74■□□□□ 0.91
TRIM11Q96F44 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.74■□□□□ 0.91
TRIM11Q96F44 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM11Q96F44 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM11Q96F44 AC092368.3-202ENST00000574180 1591 ntBASIC20.74■□□□□ 0.91
TRIM11Q96F44 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM11Q96F44 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM11Q96F44 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM11Q96F44 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM11Q96F44 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM11Q96F44 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TRIM11Q96F44 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM11Q96F44 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.73■□□□□ 0.91
TRIM11Q96F44 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM11Q96F44 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.73■□□□□ 0.91
TRIM11Q96F44 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM11Q96F44 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM11Q96F44 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM11Q96F44 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM11Q96F44 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM11Q96F44 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM11Q96F44 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM11Q96F44 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM11Q96F44 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM11Q96F44 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM11Q96F44 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM11Q96F44 AC006557.6-201ENST00000623071 864 ntBASIC20.73■□□□□ 0.91
TRIM11Q96F44 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM11Q96F44 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM11Q96F44 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM11Q96F44 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM11Q96F44 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM11Q96F44 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM11Q96F44 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM11Q96F44 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM11Q96F44 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM11Q96F44 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM11Q96F44 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRIM11Q96F44 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM11Q96F44 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM11Q96F44 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM11Q96F44 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM11Q96F44 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM11Q96F44 RPS2P52-201ENST00000469610 820 ntBASIC20.72■□□□□ 0.91
TRIM11Q96F44 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM11Q96F44 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM11Q96F44 AC060766.5-201ENST00000590539 871 ntBASIC20.72■□□□□ 0.91
TRIM11Q96F44 AL121906.2-201ENST00000621597 723 ntBASIC20.72■□□□□ 0.91
TRIM11Q96F44 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM11Q96F44 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM11Q96F44 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM11Q96F44 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM11Q96F44 AC018445.3-201ENST00000624177 1945 ntBASIC20.72■□□□□ 0.91
TRIM11Q96F44 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms