Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF31Q96EP0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF31Q96EP0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF31Q96EP0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF31Q96EP0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF31Q96EP0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF31Q96EP0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF31Q96EP0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF31Q96EP0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF31Q96EP0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF31Q96EP0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF31Q96EP0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF31Q96EP0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RNF31Q96EP0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF31Q96EP0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.9■□□□□ 0.62
RNF31Q96EP0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF31Q96EP0 AP003071.4-201ENST00000562276 1284 ntBASIC18.9■□□□□ 0.62
RNF31Q96EP0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF31Q96EP0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF31Q96EP0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
RNF31Q96EP0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.9■□□□□ 0.62
RNF31Q96EP0 CD177P1-201ENST00000606252 935 ntBASIC18.9■□□□□ 0.62
RNF31Q96EP0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF31Q96EP0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF31Q96EP0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF31Q96EP0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF31Q96EP0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF31Q96EP0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
RNF31Q96EP0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF31Q96EP0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF31Q96EP0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF31Q96EP0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF31Q96EP0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF31Q96EP0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
RNF31Q96EP0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF31Q96EP0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RNF31Q96EP0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF31Q96EP0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
RNF31Q96EP0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF31Q96EP0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF31Q96EP0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF31Q96EP0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF31Q96EP0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF31Q96EP0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF31Q96EP0 AL031963.3-201ENST00000606441 850 ntBASIC18.89■□□□□ 0.61
RNF31Q96EP0 AL121906.2-201ENST00000621597 723 ntBASIC18.89■□□□□ 0.61
RNF31Q96EP0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF31Q96EP0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF31Q96EP0 KRT8P20-201ENST00000423953 1409 ntBASIC18.89■□□□□ 0.61
RNF31Q96EP0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF31Q96EP0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF31Q96EP0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF31Q96EP0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
RNF31Q96EP0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF31Q96EP0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF31Q96EP0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF31Q96EP0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RNF31Q96EP0 HLA-G-202ENST00000376815 851 ntBASIC18.88■□□□□ 0.61
RNF31Q96EP0 HLA-G-203ENST00000376818 1127 ntBASIC18.88■□□□□ 0.61
RNF31Q96EP0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF31Q96EP0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF31Q96EP0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.88■□□□□ 0.61
RNF31Q96EP0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF31Q96EP0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF31Q96EP0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF31Q96EP0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF31Q96EP0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RNF31Q96EP0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF31Q96EP0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF31Q96EP0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF31Q96EP0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF31Q96EP0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF31Q96EP0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF31Q96EP0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF31Q96EP0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF31Q96EP0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF31Q96EP0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF31Q96EP0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RNF31Q96EP0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF31Q96EP0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF31Q96EP0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF31Q96EP0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RNF31Q96EP0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF31Q96EP0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF31Q96EP0 MIR1224-201ENST00000408193 85 ntBASIC18.87■□□□□ 0.61
RNF31Q96EP0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF31Q96EP0 AL355355.2-201ENST00000442321 338 ntBASIC18.87■□□□□ 0.61
RNF31Q96EP0 KRT8P17-201ENST00000453110 1448 ntBASIC18.87■□□□□ 0.61
RNF31Q96EP0 KRT16P5-201ENST00000455284 522 ntBASIC18.87■□□□□ 0.61
RNF31Q96EP0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF31Q96EP0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF31Q96EP0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.87■□□□□ 0.61
RNF31Q96EP0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF31Q96EP0 KRT8P9-201ENST00000558927 1449 ntBASIC18.87■□□□□ 0.61
RNF31Q96EP0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF31Q96EP0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF31Q96EP0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF31Q96EP0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF31Q96EP0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF31Q96EP0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms