Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
APH1AQ96BI3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.41■□□□□ 0.38
APH1AQ96BI3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APH1AQ96BI3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.41■□□□□ 0.38
APH1AQ96BI3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
APH1AQ96BI3 AC009237.14-201ENST00000609975 1594 ntBASIC17.4■□□□□ 0.38
APH1AQ96BI3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APH1AQ96BI3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
APH1AQ96BI3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
APH1AQ96BI3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
APH1AQ96BI3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.4■□□□□ 0.38
APH1AQ96BI3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
APH1AQ96BI3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APH1AQ96BI3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.4■□□□□ 0.38
APH1AQ96BI3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APH1AQ96BI3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
APH1AQ96BI3 KRT16P5-201ENST00000455284 522 ntBASIC17.4■□□□□ 0.38
APH1AQ96BI3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APH1AQ96BI3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.4■□□□□ 0.38
APH1AQ96BI3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.4■□□□□ 0.38
APH1AQ96BI3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APH1AQ96BI3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.4■□□□□ 0.38
APH1AQ96BI3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
APH1AQ96BI3 AC112907.3-201ENST00000577781 2400 ntBASIC17.4■□□□□ 0.38
APH1AQ96BI3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
APH1AQ96BI3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
APH1AQ96BI3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.4■□□□□ 0.38
APH1AQ96BI3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APH1AQ96BI3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
APH1AQ96BI3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
APH1AQ96BI3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APH1AQ96BI3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.39■□□□□ 0.37
APH1AQ96BI3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
APH1AQ96BI3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
APH1AQ96BI3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APH1AQ96BI3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
APH1AQ96BI3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
APH1AQ96BI3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
APH1AQ96BI3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APH1AQ96BI3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.39■□□□□ 0.37
APH1AQ96BI3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.39■□□□□ 0.37
APH1AQ96BI3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
APH1AQ96BI3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
APH1AQ96BI3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APH1AQ96BI3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
APH1AQ96BI3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
APH1AQ96BI3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
APH1AQ96BI3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
APH1AQ96BI3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
APH1AQ96BI3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
APH1AQ96BI3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.38■□□□□ 0.37
APH1AQ96BI3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.38■□□□□ 0.37
APH1AQ96BI3 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.38■□□□□ 0.37
APH1AQ96BI3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.38■□□□□ 0.37
APH1AQ96BI3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.38■□□□□ 0.37
APH1AQ96BI3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.38■□□□□ 0.37
APH1AQ96BI3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
APH1AQ96BI3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.38■□□□□ 0.37
APH1AQ96BI3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
APH1AQ96BI3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.38■□□□□ 0.37
APH1AQ96BI3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.38■□□□□ 0.37
APH1AQ96BI3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.38■□□□□ 0.37
APH1AQ96BI3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APH1AQ96BI3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APH1AQ96BI3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
APH1AQ96BI3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APH1AQ96BI3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
APH1AQ96BI3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APH1AQ96BI3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
APH1AQ96BI3 TMEM179-206ENST00000616017 1645 ntBASIC17.37■□□□□ 0.37
APH1AQ96BI3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
APH1AQ96BI3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APH1AQ96BI3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APH1AQ96BI3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.37■□□□□ 0.37
APH1AQ96BI3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms