Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CLDN23Q96B33 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CLDN23Q96B33 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CLDN23Q96B33 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
CLDN23Q96B33 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN23Q96B33 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN23Q96B33 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.69■□□□□ 0.74
CLDN23Q96B33 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CLDN23Q96B33 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.69■□□□□ 0.74
CLDN23Q96B33 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN23Q96B33 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN23Q96B33 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN23Q96B33 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.69■□□□□ 0.74
CLDN23Q96B33 TMEM179-206ENST00000616017 1645 ntBASIC19.69■□□□□ 0.74
CLDN23Q96B33 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN23Q96B33 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN23Q96B33 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN23Q96B33 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN23Q96B33 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN23Q96B33 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN23Q96B33 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN23Q96B33 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN23Q96B33 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN23Q96B33 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDN23Q96B33 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.68■□□□□ 0.74
CLDN23Q96B33 VENTXP5-201ENST00000523979 775 ntBASIC19.68■□□□□ 0.74
CLDN23Q96B33 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN23Q96B33 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN23Q96B33 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN23Q96B33 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN23Q96B33 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN23Q96B33 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
CLDN23Q96B33 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN23Q96B33 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLDN23Q96B33 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN23Q96B33 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN23Q96B33 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN23Q96B33 KRT8P8-201ENST00000434750 1448 ntBASIC19.68■□□□□ 0.74
CLDN23Q96B33 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN23Q96B33 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN23Q96B33 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLDN23Q96B33 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN23Q96B33 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN23Q96B33 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN23Q96B33 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN23Q96B33 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN23Q96B33 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.67■□□□□ 0.74
CLDN23Q96B33 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN23Q96B33 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN23Q96B33 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN23Q96B33 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.67■□□□□ 0.74
CLDN23Q96B33 AP003041.3-201ENST00000527151 707 ntBASIC19.67■□□□□ 0.74
CLDN23Q96B33 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
CLDN23Q96B33 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN23Q96B33 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.67■□□□□ 0.74
CLDN23Q96B33 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.67■□□□□ 0.74
CLDN23Q96B33 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN23Q96B33 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN23Q96B33 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN23Q96B33 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN23Q96B33 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN23Q96B33 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN23Q96B33 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN23Q96B33 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLDN23Q96B33 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN23Q96B33 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN23Q96B33 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN23Q96B33 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN23Q96B33 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN23Q96B33 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN23Q96B33 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CLDN23Q96B33 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN23Q96B33 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.66■□□□□ 0.74
CLDN23Q96B33 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN23Q96B33 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.66■□□□□ 0.74
CLDN23Q96B33 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.66■□□□□ 0.74
CLDN23Q96B33 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN23Q96B33 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
CLDN23Q96B33 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLDN23Q96B33 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN23Q96B33 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CLDN23Q96B33 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN23Q96B33 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
CLDN23Q96B33 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN23Q96B33 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN23Q96B33 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN23Q96B33 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN23Q96B33 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN23Q96B33 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN23Q96B33 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN23Q96B33 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN23Q96B33 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN23Q96B33 AP000523.1-201ENST00000398242 1049 ntBASIC19.65■□□□□ 0.74
CLDN23Q96B33 ATP5G2P1-201ENST00000433580 426 ntBASIC19.65■□□□□ 0.74
CLDN23Q96B33 ZNF444P1-201ENST00000559497 298 ntBASIC19.65■□□□□ 0.74
CLDN23Q96B33 AL160286.2-201ENST00000567150 934 ntBASIC19.65■□□□□ 0.74
CLDN23Q96B33 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN23Q96B33 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN23Q96B33 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
CLDN23Q96B33 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms