Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9Q92623 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.68■□□□□ 0.58
TTC9Q92623 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9Q92623 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.68■□□□□ 0.58
TTC9Q92623 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9Q92623 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TTC9Q92623 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9Q92623 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.68■□□□□ 0.58
TTC9Q92623 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.68■□□□□ 0.58
TTC9Q92623 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.68■□□□□ 0.58
TTC9Q92623 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.68■□□□□ 0.58
TTC9Q92623 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.68■□□□□ 0.58
TTC9Q92623 AC010203.1-204ENST00000548782 407 ntBASIC18.68■□□□□ 0.58
TTC9Q92623 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.68■□□□□ 0.58
TTC9Q92623 AC006011.2-201ENST00000621313 1158 ntBASIC18.68■□□□□ 0.58
TTC9Q92623 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9Q92623 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9Q92623 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9Q92623 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9Q92623 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.68■□□□□ 0.58
TTC9Q92623 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TTC9Q92623 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.68■□□□□ 0.58
TTC9Q92623 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9Q92623 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TTC9Q92623 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9Q92623 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC9Q92623 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC9Q92623 AC007225.1-201ENST00000566331 1836 ntBASIC18.67■□□□□ 0.58
TTC9Q92623 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TTC9Q92623 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC9Q92623 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC9Q92623 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC9Q92623 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TTC9Q92623 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC9Q92623 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.67■□□□□ 0.58
TTC9Q92623 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC9Q92623 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.67■□□□□ 0.58
TTC9Q92623 AC116562.2-201ENST00000507042 360 ntBASIC18.67■□□□□ 0.58
TTC9Q92623 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.67■□□□□ 0.58
TTC9Q92623 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.67■□□□□ 0.58
TTC9Q92623 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.67■□□□□ 0.58
TTC9Q92623 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC9Q92623 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TTC9Q92623 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.67■□□□□ 0.58
TTC9Q92623 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TTC9Q92623 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC9Q92623 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC9Q92623 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TTC9Q92623 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9Q92623 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TTC9Q92623 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
TTC9Q92623 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9Q92623 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9Q92623 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9Q92623 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9Q92623 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9Q92623 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9Q92623 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.66■□□□□ 0.58
TTC9Q92623 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9Q92623 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TTC9Q92623 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.66■□□□□ 0.58
TTC9Q92623 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9Q92623 FP700111.2-201ENST00000619190 1892 ntBASIC18.66■□□□□ 0.58
TTC9Q92623 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.66■□□□□ 0.58
TTC9Q92623 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9Q92623 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
TTC9Q92623 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.66■□□□□ 0.58
TTC9Q92623 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9Q92623 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9Q92623 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC9Q92623 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TTC9Q92623 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9Q92623 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9Q92623 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9Q92623 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9Q92623 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9Q92623 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9Q92623 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.65■□□□□ 0.58
TTC9Q92623 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9Q92623 AP002982.1-201ENST00000492365 877 ntBASIC18.65■□□□□ 0.58
TTC9Q92623 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9Q92623 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.65■□□□□ 0.58
TTC9Q92623 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.65■□□□□ 0.58
TTC9Q92623 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.65■□□□□ 0.58
TTC9Q92623 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.65■□□□□ 0.58
TTC9Q92623 AC091076.1-201ENST00000610741 619 ntBASIC18.65■□□□□ 0.58
TTC9Q92623 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.65■□□□□ 0.58
TTC9Q92623 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9Q92623 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9Q92623 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9Q92623 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
TTC9Q92623 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.65■□□□□ 0.58
TTC9Q92623 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9Q92623 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9Q92623 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.65■□□□□ 0.58
TTC9Q92623 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC9Q92623 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TTC9Q92623 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TTC9Q92623 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.64■□□□□ 0.58
TTC9Q92623 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms