Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
SYNE2Q8WXH0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
SYNE2Q8WXH0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
SYNE2Q8WXH0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 HBZP1-201ENST00000354915 429 ntBASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 TSPY17P-201ENST00000450329 467 ntBASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 EMD-201ENST00000369835 966 ntTSL 3 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 CD99-202ENST00000381180 530 ntTSL 2 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 C11orf96-202ENST00000528572 1834 ntBASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 AC079089.2-201ENST00000531211 1277 ntBASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC8.02□□□□□ -1.13
SYNE2Q8WXH0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 AC087641.1-201ENST00000557561 1021 ntBASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 AC005829.1-201ENST00000570002 483 ntBASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 TMEM179-206ENST00000616017 1645 ntBASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 H19-210ENST00000439725 1929 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 MFAP1P1-201ENST00000442257 1255 ntBASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 FGFR3P6-201ENST00000457012 610 ntBASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 SCARNA2-201ENST00000458748 420 ntBASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNE2Q8WXH0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms