Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC107Q8WV48 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CCDC107Q8WV48 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC107Q8WV48 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 TREX1-205ENST00000625293 1783 ntBASIC16.94■□□□□ 0.3
CCDC107Q8WV48 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC107Q8WV48 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 FAM21FP-204ENST00000608637 956 ntBASIC16.93■□□□□ 0.3
CCDC107Q8WV48 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC107Q8WV48 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 DPP3P2-201ENST00000416030 1696 ntBASIC16.92■□□□□ 0.3
CCDC107Q8WV48 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.92■□□□□ 0.3
CCDC107Q8WV48 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 TERF1P5-201ENST00000477545 1207 ntBASIC16.92■□□□□ 0.3
CCDC107Q8WV48 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 AC137761.2-201ENST00000561729 223 ntBASIC16.92■□□□□ 0.3
CCDC107Q8WV48 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 AC145350.3-201ENST00000569033 163 ntBASIC16.92■□□□□ 0.3
CCDC107Q8WV48 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 MIR6821-201ENST00000617625 74 ntBASIC16.92■□□□□ 0.3
CCDC107Q8WV48 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 KRT8P36-201ENST00000489121 1440 ntBASIC16.92■□□□□ 0.3
CCDC107Q8WV48 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC107Q8WV48 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms