Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.68■□□□□ 0.42
SNX33Q8WV41 AL050303.2-201ENST00000619798 666 ntBASIC17.68■□□□□ 0.42
SNX33Q8WV41 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SNX33Q8WV41 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX33Q8WV41 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX33Q8WV41 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
SNX33Q8WV41 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX33Q8WV41 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX33Q8WV41 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX33Q8WV41 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX33Q8WV41 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX33Q8WV41 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX33Q8WV41 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX33Q8WV41 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX33Q8WV41 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX33Q8WV41 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.67■□□□□ 0.42
SNX33Q8WV41 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX33Q8WV41 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX33Q8WV41 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX33Q8WV41 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX33Q8WV41 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SNX33Q8WV41 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SNX33Q8WV41 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SNX33Q8WV41 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX33Q8WV41 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX33Q8WV41 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX33Q8WV41 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
SNX33Q8WV41 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX33Q8WV41 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX33Q8WV41 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX33Q8WV41 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX33Q8WV41 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX33Q8WV41 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX33Q8WV41 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX33Q8WV41 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX33Q8WV41 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX33Q8WV41 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX33Q8WV41 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX33Q8WV41 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SNX33Q8WV41 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX33Q8WV41 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX33Q8WV41 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.66■□□□□ 0.42
SNX33Q8WV41 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX33Q8WV41 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX33Q8WV41 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX33Q8WV41 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX33Q8WV41 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
SNX33Q8WV41 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX33Q8WV41 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX33Q8WV41 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SNX33Q8WV41 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SNX33Q8WV41 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX33Q8WV41 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX33Q8WV41 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX33Q8WV41 TNXA-203ENST00000507684 2038 ntBASIC17.65■□□□□ 0.42
SNX33Q8WV41 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX33Q8WV41 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX33Q8WV41 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX33Q8WV41 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX33Q8WV41 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX33Q8WV41 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.65■□□□□ 0.42
SNX33Q8WV41 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.65■□□□□ 0.42
SNX33Q8WV41 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.65■□□□□ 0.42
SNX33Q8WV41 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.65■□□□□ 0.42
SNX33Q8WV41 RARRES2P4-201ENST00000514074 484 ntBASIC17.65■□□□□ 0.42
SNX33Q8WV41 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX33Q8WV41 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.65■□□□□ 0.42
SNX33Q8WV41 AC104771.1-201ENST00000603335 964 ntBASIC17.65■□□□□ 0.42
SNX33Q8WV41 AC016405.3-201ENST00000607710 860 ntBASIC17.65■□□□□ 0.42
SNX33Q8WV41 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.65■□□□□ 0.42
SNX33Q8WV41 MKRN4P-201ENST00000444706 1521 ntBASIC17.65■□□□□ 0.42
SNX33Q8WV41 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX33Q8WV41 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX33Q8WV41 AC009237.14-201ENST00000609975 1594 ntBASIC17.65■□□□□ 0.42
SNX33Q8WV41 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
SNX33Q8WV41 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX33Q8WV41 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX33Q8WV41 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX33Q8WV41 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX33Q8WV41 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX33Q8WV41 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX33Q8WV41 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX33Q8WV41 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SNX33Q8WV41 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.64■□□□□ 0.42
SNX33Q8WV41 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX33Q8WV41 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX33Q8WV41 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.64■□□□□ 0.41
SNX33Q8WV41 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX33Q8WV41 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX33Q8WV41 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX33Q8WV41 AL355802.2-201ENST00000402069 882 ntBASIC17.64■□□□□ 0.41
SNX33Q8WV41 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.64■□□□□ 0.41
SNX33Q8WV41 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX33Q8WV41 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX33Q8WV41 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX33Q8WV41 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
SNX33Q8WV41 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.64■□□□□ 0.41
SNX33Q8WV41 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX33Q8WV41 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX33Q8WV41 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms