Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00308Q8TCZ7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00308Q8TCZ7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00308Q8TCZ7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00308Q8TCZ7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00308Q8TCZ7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00308Q8TCZ7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00308Q8TCZ7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00308Q8TCZ7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00308Q8TCZ7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00308Q8TCZ7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 NOC2LP2-201ENST00000407594 1944 ntBASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 KRT16P3-201ENST00000439127 1283 ntBASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 AC006333.2-201ENST00000607957 2099 ntBASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LINC00308Q8TCZ7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 AL161938.1-201ENST00000569833 2180 ntBASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00308Q8TCZ7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 KRT16P2-201ENST00000414673 1423 ntBASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 WIZP1-201ENST00000531444 2299 ntBASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
LINC00308Q8TCZ7 MIR3621-201ENST00000580529 85 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms