Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 HES2-206ENST00000489730 730 ntTSL 2 BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 AC120498.8-201ENST00000614275 531 ntBASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23■■□□□ 1.27
SMARCC2Q8TAQ2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.99■■□□□ 1.27
SMARCC2Q8TAQ2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMARCC2Q8TAQ2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
SMARCC2Q8TAQ2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.99■■□□□ 1.27
SMARCC2Q8TAQ2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
SMARCC2Q8TAQ2 AC116351.2-201ENST00000606540 1585 ntBASIC22.99■■□□□ 1.27
SMARCC2Q8TAQ2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMARCC2Q8TAQ2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.99■■□□□ 1.27
SMARCC2Q8TAQ2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.99■■□□□ 1.27
SMARCC2Q8TAQ2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMARCC2Q8TAQ2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMARCC2Q8TAQ2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
SMARCC2Q8TAQ2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.99■■□□□ 1.27
SMARCC2Q8TAQ2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
SMARCC2Q8TAQ2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SMARCC2Q8TAQ2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 AC018553.1-201ENST00000616682 1458 ntBASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 AC069544.1-201ENST00000609399 999 ntBASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SMARCC2Q8TAQ2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 AC098590.1-201ENST00000468126 897 ntBASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 AC233263.1-201ENST00000578059 224 ntBASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMARCC2Q8TAQ2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
SMARCC2Q8TAQ2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
SMARCC2Q8TAQ2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMARCC2Q8TAQ2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.96■■□□□ 1.27
SMARCC2Q8TAQ2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SMARCC2Q8TAQ2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.96■■□□□ 1.27
SMARCC2Q8TAQ2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.96■■□□□ 1.27
SMARCC2Q8TAQ2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
SMARCC2Q8TAQ2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
SMARCC2Q8TAQ2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.96■■□□□ 1.27
SMARCC2Q8TAQ2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SMARCC2Q8TAQ2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMARCC2Q8TAQ2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMARCC2Q8TAQ2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMARCC2Q8TAQ2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
SMARCC2Q8TAQ2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms