Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC16Q8NEE8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.61■□□□□ 0.89
TTC16Q8NEE8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TTC16Q8NEE8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC16Q8NEE8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.61■□□□□ 0.89
TTC16Q8NEE8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TTC16Q8NEE8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TTC16Q8NEE8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC16Q8NEE8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC16Q8NEE8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC16Q8NEE8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TTC16Q8NEE8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC16Q8NEE8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.6■□□□□ 0.89
TTC16Q8NEE8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC16Q8NEE8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC16Q8NEE8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.6■□□□□ 0.89
TTC16Q8NEE8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 LINC01023-201ENST00000606054 436 ntBASIC20.59■□□□□ 0.89
TTC16Q8NEE8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TTC16Q8NEE8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TTC16Q8NEE8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.58■□□□□ 0.89
TTC16Q8NEE8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TTC16Q8NEE8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
TTC16Q8NEE8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
TTC16Q8NEE8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TTC16Q8NEE8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
TTC16Q8NEE8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
TTC16Q8NEE8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.58■□□□□ 0.89
TTC16Q8NEE8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TTC16Q8NEE8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.58■□□□□ 0.89
TTC16Q8NEE8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.58■□□□□ 0.89
TTC16Q8NEE8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TTC16Q8NEE8 KRT16P6-202ENST00000425692 1426 ntBASIC20.58■□□□□ 0.88
TTC16Q8NEE8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TTC16Q8NEE8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 AL353807.1-201ENST00000427475 662 ntBASIC20.57■□□□□ 0.88
TTC16Q8NEE8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 CR392000.1-201ENST00000624770 1228 ntBASIC20.57■□□□□ 0.88
TTC16Q8NEE8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 AP006587.1-201ENST00000534129 1502 ntBASIC20.57■□□□□ 0.88
TTC16Q8NEE8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC16Q8NEE8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 AC087499.1-201ENST00000418141 1075 ntBASIC20.56■□□□□ 0.88
TTC16Q8NEE8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms