Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 AFG3L1P-217ENST00000557444 2447 ntBASIC22.25■■□□□ 1.15
RETREG2Q8NC44 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.24■■□□□ 1.15
RETREG2Q8NC44 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RETREG2Q8NC44 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RETREG2Q8NC44 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RETREG2Q8NC44 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RETREG2Q8NC44 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.24■■□□□ 1.15
RETREG2Q8NC44 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.24■■□□□ 1.15
RETREG2Q8NC44 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.24■■□□□ 1.15
RETREG2Q8NC44 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RETREG2Q8NC44 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RETREG2Q8NC44 CD177P1-201ENST00000606252 935 ntBASIC22.24■■□□□ 1.15
RETREG2Q8NC44 AL353708.3-201ENST00000610272 989 ntBASIC22.24■■□□□ 1.15
RETREG2Q8NC44 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.24■■□□□ 1.15
RETREG2Q8NC44 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
RETREG2Q8NC44 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
RETREG2Q8NC44 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.24■■□□□ 1.15
RETREG2Q8NC44 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 NBPF21P-201ENST00000425093 1451 ntBASIC22.23■■□□□ 1.15
RETREG2Q8NC44 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.23■■□□□ 1.15
RETREG2Q8NC44 AC112907.3-201ENST00000577781 2400 ntBASIC22.22■■□□□ 1.15
RETREG2Q8NC44 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 TMPOP1-202ENST00000424642 1267 ntBASIC22.22■■□□□ 1.15
RETREG2Q8NC44 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.22■■□□□ 1.15
RETREG2Q8NC44 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 KRT8P20-201ENST00000423953 1409 ntBASIC22.22■■□□□ 1.15
RETREG2Q8NC44 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RETREG2Q8NC44 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 PCDHAC2-203ENST00000615316 3011 ntBASIC22.21■■□□□ 1.15
RETREG2Q8NC44 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RETREG2Q8NC44 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms