Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.93■□□□□ 0.62
LINC01555Q8NAE3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 TUBB8P6-201ENST00000436895 1288 ntBASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.92■□□□□ 0.62
LINC01555Q8NAE3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 AC008550.1-201ENST00000511500 884 ntBASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 RARRES2P10-201ENST00000564312 460 ntBASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 HTR7P1-201ENST00000538670 1336 ntBASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.91■□□□□ 0.62
LINC01555Q8NAE3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 C1QL1P1-201ENST00000568105 661 ntBASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 Z99916.2-201ENST00000604037 246 ntBASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LINC01555Q8NAE3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LINC01555Q8NAE3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LINC01555Q8NAE3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms