Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PAF1Q8N7H5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.14■□□□□ 0.81
PAF1Q8N7H5 POM121L13P-201ENST00000422362 380 ntBASIC20.14■□□□□ 0.81
PAF1Q8N7H5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PAF1Q8N7H5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.14■□□□□ 0.81
PAF1Q8N7H5 RPS2P52-201ENST00000469610 820 ntBASIC20.14■□□□□ 0.81
PAF1Q8N7H5 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PAF1Q8N7H5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.14■□□□□ 0.81
PAF1Q8N7H5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.14■□□□□ 0.81
PAF1Q8N7H5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.14■□□□□ 0.81
PAF1Q8N7H5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
PAF1Q8N7H5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PAF1Q8N7H5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PAF1Q8N7H5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.14■□□□□ 0.81
PAF1Q8N7H5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PAF1Q8N7H5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PAF1Q8N7H5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PAF1Q8N7H5 CROCCP1-201ENST00000426910 5675 ntBASIC20.13■□□□□ 0.81
PAF1Q8N7H5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 AC120498.8-201ENST00000614275 531 ntBASIC20.13■□□□□ 0.81
PAF1Q8N7H5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PAF1Q8N7H5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 AC128676.1-201ENST00000454392 318 ntBASIC20.12■□□□□ 0.81
PAF1Q8N7H5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 PRKY-204ENST00000533551 1019 ntBASIC20.12■□□□□ 0.81
PAF1Q8N7H5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 AL512408.1-201ENST00000569378 2000 ntBASIC20.12■□□□□ 0.81
PAF1Q8N7H5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PAF1Q8N7H5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PAF1Q8N7H5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PAF1Q8N7H5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.1■□□□□ 0.81
PAF1Q8N7H5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.1■□□□□ 0.81
PAF1Q8N7H5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.1■□□□□ 0.81
PAF1Q8N7H5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PAF1Q8N7H5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.1■□□□□ 0.81
PAF1Q8N7H5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms