Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 RPS2P4-201ENST00000476944 856 ntBASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 AC004264.1-201ENST00000608354 794 ntBASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH20Q8N6Y1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 RARRES2P10-201ENST00000564312 460 ntBASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH20Q8N6Y1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 AL135905.2-201ENST00000584934 1404 ntBASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 AP006587.1-201ENST00000534129 1502 ntBASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH20Q8N6Y1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.02■□□□□ 0.79
PCDH20Q8N6Y1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH20Q8N6Y1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH20Q8N6Y1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 AC012618.2-201ENST00000428058 849 ntBASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH20Q8N6Y1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms