Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 AP006294.2-201ENST00000641667 209 ntBASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 AC073130.3-201ENST00000624389 2278 ntBASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRAM1L1Q8N609 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 HTR7P1-201ENST00000538670 1336 ntBASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAM1L1Q8N609 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 C1QL1P1-201ENST00000568105 661 ntBASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 KRT8P8-201ENST00000434750 1448 ntBASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 AL135905.2-201ENST00000584934 1404 ntBASIC19.42■□□□□ 0.7
TRAM1L1Q8N609 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1L1Q8N609 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1L1Q8N609 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms