Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 AC110285.5-201ENST00000611501 352 ntBASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC33Q8N5R6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CCDC33Q8N5R6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC33Q8N5R6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC33Q8N5R6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC33Q8N5R6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC33Q8N5R6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
CCDC33Q8N5R6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC33Q8N5R6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CCDC33Q8N5R6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC33Q8N5R6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 AL049637.2-201ENST00000641778 930 ntBASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CCDC33Q8N5R6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 KRT8P17-201ENST00000453110 1448 ntBASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC33Q8N5R6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC33Q8N5R6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC33Q8N5R6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC33Q8N5R6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC33Q8N5R6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC33Q8N5R6 AC125437.2-201ENST00000625180 2167 ntBASIC20.55■□□□□ 0.88
CCDC33Q8N5R6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC33Q8N5R6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms