Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 HMGA1P5-201ENST00000412453 271 ntBASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 AK4P3-201ENST00000418260 669 ntBASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 FAM87A-204ENST00000613235 858 ntBASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 AC063952.2-201ENST00000498792 1227 ntBASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.96■□□□□ 0.79
SYNPOQ8N3V7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 AC091076.1-201ENST00000610741 619 ntBASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPOQ8N3V7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 AC022616.7-201ENST00000525383 220 ntBASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 SLC25A1P4-201ENST00000567977 778 ntBASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 AC116562.4-202ENST00000641738 218 ntBASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPOQ8N3V7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 AC018553.1-201ENST00000616682 1458 ntBASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 AL121603.2-201ENST00000557373 2117 ntBASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 CCR12P-201ENST00000446203 998 ntBASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SYNPOQ8N3V7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms