Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 AC116562.2-201ENST00000507042 360 ntBASIC30.81■■■□□ 2.52
VPS8Q8N3P4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
VPS8Q8N3P4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC30.8■■■□□ 2.52
VPS8Q8N3P4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
VPS8Q8N3P4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
VPS8Q8N3P4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC30.8■■■□□ 2.52
VPS8Q8N3P4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
VPS8Q8N3P4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
VPS8Q8N3P4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
VPS8Q8N3P4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
VPS8Q8N3P4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC30.8■■■□□ 2.52
VPS8Q8N3P4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
VPS8Q8N3P4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
VPS8Q8N3P4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
VPS8Q8N3P4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC30.8■■■□□ 2.52
VPS8Q8N3P4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
VPS8Q8N3P4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
VPS8Q8N3P4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
VPS8Q8N3P4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
VPS8Q8N3P4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
VPS8Q8N3P4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
VPS8Q8N3P4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
VPS8Q8N3P4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC30.79■■■□□ 2.52
VPS8Q8N3P4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
VPS8Q8N3P4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC30.79■■■□□ 2.52
VPS8Q8N3P4 Z85996.1-201ENST00000494644 937 ntBASIC30.79■■■□□ 2.52
VPS8Q8N3P4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC30.79■■■□□ 2.52
VPS8Q8N3P4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC30.79■■■□□ 2.52
VPS8Q8N3P4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC30.79■■■□□ 2.52
VPS8Q8N3P4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
VPS8Q8N3P4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
VPS8Q8N3P4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
VPS8Q8N3P4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC30.78■■■□□ 2.52
VPS8Q8N3P4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC30.78■■■□□ 2.52
VPS8Q8N3P4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
VPS8Q8N3P4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
VPS8Q8N3P4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
VPS8Q8N3P4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
VPS8Q8N3P4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
VPS8Q8N3P4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC30.78■■■□□ 2.52
VPS8Q8N3P4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
VPS8Q8N3P4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC30.78■■■□□ 2.52
VPS8Q8N3P4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC30.78■■■□□ 2.52
VPS8Q8N3P4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
VPS8Q8N3P4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC30.78■■■□□ 2.52
VPS8Q8N3P4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
VPS8Q8N3P4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
VPS8Q8N3P4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
VPS8Q8N3P4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
VPS8Q8N3P4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC30.77■■■□□ 2.52
VPS8Q8N3P4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC30.77■■■□□ 2.52
VPS8Q8N3P4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC30.77■■■□□ 2.52
VPS8Q8N3P4 BX088651.1-201ENST00000540551 451 ntBASIC30.77■■■□□ 2.52
VPS8Q8N3P4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC30.77■■■□□ 2.52
VPS8Q8N3P4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC30.77■■■□□ 2.52
VPS8Q8N3P4 CR392000.1-201ENST00000624770 1228 ntBASIC30.77■■■□□ 2.52
VPS8Q8N3P4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC30.77■■■□□ 2.52
VPS8Q8N3P4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
VPS8Q8N3P4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
VPS8Q8N3P4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
VPS8Q8N3P4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC30.76■■■□□ 2.52
VPS8Q8N3P4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
VPS8Q8N3P4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
VPS8Q8N3P4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC30.76■■■□□ 2.51
VPS8Q8N3P4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
VPS8Q8N3P4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC30.76■■■□□ 2.51
VPS8Q8N3P4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
VPS8Q8N3P4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
VPS8Q8N3P4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
VPS8Q8N3P4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC30.75■■■□□ 2.51
VPS8Q8N3P4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC30.75■■■□□ 2.51
VPS8Q8N3P4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
VPS8Q8N3P4 AC125437.2-201ENST00000625180 2167 ntBASIC30.75■■■□□ 2.51
VPS8Q8N3P4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC30.75■■■□□ 2.51
VPS8Q8N3P4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
VPS8Q8N3P4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
VPS8Q8N3P4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC30.75■■■□□ 2.51
VPS8Q8N3P4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
VPS8Q8N3P4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC30.75■■■□□ 2.51
VPS8Q8N3P4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
VPS8Q8N3P4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC30.75■■■□□ 2.51
VPS8Q8N3P4 KRT17P2-201ENST00000300992 1314 ntBASIC30.75■■■□□ 2.51
VPS8Q8N3P4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
VPS8Q8N3P4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
VPS8Q8N3P4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms