Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 AC116351.2-201ENST00000606540 1585 ntBASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 AC018553.1-201ENST00000616682 1458 ntBASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 SNORA78-201ENST00000459373 127 ntBASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 AC233702.5-201ENST00000584107 538 ntBASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 HTR7P1-201ENST00000538670 1336 ntBASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM48Q8IWZ4 BX119927.1-201ENST00000636596 1552 ntBASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 AP005212.1-201ENST00000581547 1997 ntBASIC19.23■□□□□ 0.67
TRIM48Q8IWZ4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 AL353807.1-201ENST00000427475 662 ntBASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 MIR4497-201ENST00000583208 89 ntBASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 AL049637.2-201ENST00000641778 930 ntBASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRIM48Q8IWZ4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 FEM1AP1-201ENST00000431297 1995 ntBASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
TRIM48Q8IWZ4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms