Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
HERC6Q8IVU3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
HERC6Q8IVU3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.28■■□□□ 1
HERC6Q8IVU3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.28■■□□□ 1
HERC6Q8IVU3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
HERC6Q8IVU3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HERC6Q8IVU3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HERC6Q8IVU3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.28■■□□□ 1
HERC6Q8IVU3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
HERC6Q8IVU3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HERC6Q8IVU3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.27■■□□□ 1
HERC6Q8IVU3 TFP1-202ENST00000475455 1573 ntBASIC21.27■■□□□ 1
HERC6Q8IVU3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.27■■□□□ 1
HERC6Q8IVU3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.27■■□□□ 1
HERC6Q8IVU3 PKD1P6-201ENST00000343738 4769 ntBASIC21.27■■□□□ 1
HERC6Q8IVU3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.27■■□□□ 1
HERC6Q8IVU3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.27■■□□□ 1
HERC6Q8IVU3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HERC6Q8IVU3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
HERC6Q8IVU3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.27■■□□□ 1
HERC6Q8IVU3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.27■■□□□ 1
HERC6Q8IVU3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HERC6Q8IVU3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
HERC6Q8IVU3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.27■■□□□ 1
HERC6Q8IVU3 MFAP1P1-201ENST00000442257 1255 ntBASIC21.27■■□□□ 1
HERC6Q8IVU3 AC008040.2-201ENST00000461049 708 ntBASIC21.27■■□□□ 1
HERC6Q8IVU3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.27■■□□□ 1
HERC6Q8IVU3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.27■■□□□ 1
HERC6Q8IVU3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.27■■□□□ 1
HERC6Q8IVU3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.27■■□□□ 1
HERC6Q8IVU3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.27■■□□□ 1
HERC6Q8IVU3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.27■■□□□ 1
HERC6Q8IVU3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.27■□□□□ 0.99
HERC6Q8IVU3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.27■□□□□ 0.99
HERC6Q8IVU3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.27■□□□□ 0.99
HERC6Q8IVU3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HERC6Q8IVU3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 SLC25A1P2-201ENST00000430693 912 ntBASIC21.26■□□□□ 0.99
HERC6Q8IVU3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HERC6Q8IVU3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 AC096733.2-201ENST00000609937 1394 ntBASIC21.25■□□□□ 0.99
HERC6Q8IVU3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 AC004951.3-201ENST00000418645 1148 ntBASIC21.25■□□□□ 0.99
HERC6Q8IVU3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 PCED1CP-201ENST00000419887 785 ntBASIC21.25■□□□□ 0.99
HERC6Q8IVU3 FAM86EP-206ENST00000510506 987 ntBASIC21.25■□□□□ 0.99
HERC6Q8IVU3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 AC010653.2-201ENST00000623505 997 ntBASIC21.25■□□□□ 0.99
HERC6Q8IVU3 AL121956.5-201ENST00000625261 221 ntBASIC21.25■□□□□ 0.99
HERC6Q8IVU3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HERC6Q8IVU3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HERC6Q8IVU3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.24■□□□□ 0.99
HERC6Q8IVU3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HERC6Q8IVU3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HERC6Q8IVU3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HERC6Q8IVU3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HERC6Q8IVU3 AC007663.1-201ENST00000438948 1240 ntBASIC21.24■□□□□ 0.99
HERC6Q8IVU3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
HERC6Q8IVU3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.24■□□□□ 0.99
HERC6Q8IVU3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.24■□□□□ 0.99
HERC6Q8IVU3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.24■□□□□ 0.99
HERC6Q8IVU3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
HERC6Q8IVU3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.24■□□□□ 0.99
HERC6Q8IVU3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
HERC6Q8IVU3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HERC6Q8IVU3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.23■□□□□ 0.99
HERC6Q8IVU3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms