Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC71Q8IV32 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC71Q8IV32 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC71Q8IV32 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC71Q8IV32 AC100791.3-201ENST00000617619 330 ntBASIC18.38■□□□□ 0.53
CCDC71Q8IV32 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC71Q8IV32 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC71Q8IV32 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC71Q8IV32 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC71Q8IV32 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC71Q8IV32 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC71Q8IV32 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC71Q8IV32 BX119927.1-201ENST00000636596 1552 ntBASIC18.38■□□□□ 0.53
CCDC71Q8IV32 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC71Q8IV32 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 AL589743.5-201ENST00000616611 1050 ntBASIC18.37■□□□□ 0.53
CCDC71Q8IV32 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 DPP3P2-201ENST00000416030 1696 ntBASIC18.37■□□□□ 0.53
CCDC71Q8IV32 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC71Q8IV32 NEFHP1-201ENST00000412845 2629 ntBASIC18.36■□□□□ 0.53
CCDC71Q8IV32 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 UNC93B4-201ENST00000505679 747 ntBASIC18.36■□□□□ 0.53
CCDC71Q8IV32 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71Q8IV32 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 MCRIP2P1-201ENST00000394346 511 ntBASIC18.35■□□□□ 0.53
CCDC71Q8IV32 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 RPS2P4-201ENST00000476944 856 ntBASIC18.35■□□□□ 0.53
CCDC71Q8IV32 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC71Q8IV32 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 AL596275.1-201ENST00000423464 877 ntBASIC18.34■□□□□ 0.53
CCDC71Q8IV32 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms