Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL23A1Q86Y22 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL23A1Q86Y22 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL23A1Q86Y22 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL23A1Q86Y22 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.77■■□□□ 1.56
COL23A1Q86Y22 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
COL23A1Q86Y22 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL23A1Q86Y22 CNP-204ENST00000472031 1019 ntTSL 2 BASIC24.77■■□□□ 1.56
COL23A1Q86Y22 CA15P1-201ENST00000481698 905 ntBASIC24.77■■□□□ 1.56
COL23A1Q86Y22 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL23A1Q86Y22 AC092119.3-201ENST00000612618 583 ntBASIC24.77■■□□□ 1.56
COL23A1Q86Y22 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL23A1Q86Y22 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.77■■□□□ 1.56
COL23A1Q86Y22 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL23A1Q86Y22 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL23A1Q86Y22 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC24.76■■□□□ 1.55
COL23A1Q86Y22 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL23A1Q86Y22 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC24.76■■□□□ 1.55
COL23A1Q86Y22 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
COL23A1Q86Y22 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
COL23A1Q86Y22 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL23A1Q86Y22 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC24.76■■□□□ 1.55
COL23A1Q86Y22 AL845331.1-201ENST00000424978 1190 ntBASIC24.76■■□□□ 1.55
COL23A1Q86Y22 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC24.76■■□□□ 1.55
COL23A1Q86Y22 SDHD-206ENST00000528182 754 ntTSL 3 BASIC24.76■■□□□ 1.55
COL23A1Q86Y22 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC24.76■■□□□ 1.55
COL23A1Q86Y22 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 AC244015.2-201ENST00000616358 1861 ntBASIC24.75■■□□□ 1.55
COL23A1Q86Y22 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 LINC01311-201ENST00000565162 1445 ntBASIC24.75■■□□□ 1.55
COL23A1Q86Y22 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 AL049796.1-201ENST00000565336 1766 ntBASIC24.75■■□□□ 1.55
COL23A1Q86Y22 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
COL23A1Q86Y22 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.74■■□□□ 1.55
COL23A1Q86Y22 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
COL23A1Q86Y22 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL23A1Q86Y22 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC24.74■■□□□ 1.55
COL23A1Q86Y22 SPDYE13P-201ENST00000445314 798 ntBASIC24.74■■□□□ 1.55
COL23A1Q86Y22 PRR29-207ENST00000580752 458 ntTSL 3 BASIC24.74■■□□□ 1.55
COL23A1Q86Y22 NT5C-210ENST00000582160 860 ntTSL 2 BASIC24.74■■□□□ 1.55
COL23A1Q86Y22 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC24.74■■□□□ 1.55
COL23A1Q86Y22 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
COL23A1Q86Y22 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC24.74■■□□□ 1.55
COL23A1Q86Y22 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
COL23A1Q86Y22 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC24.74■■□□□ 1.55
COL23A1Q86Y22 KRT16P6-202ENST00000425692 1426 ntBASIC24.74■■□□□ 1.55
COL23A1Q86Y22 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
COL23A1Q86Y22 DPP3P2-201ENST00000416030 1696 ntBASIC24.74■■□□□ 1.55
COL23A1Q86Y22 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC24.74■■□□□ 1.55
COL23A1Q86Y22 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL23A1Q86Y22 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
COL23A1Q86Y22 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL23A1Q86Y22 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
COL23A1Q86Y22 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL23A1Q86Y22 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC24.73■■□□□ 1.55
COL23A1Q86Y22 STARP1-201ENST00000397973 869 ntBASIC24.73■■□□□ 1.55
COL23A1Q86Y22 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
COL23A1Q86Y22 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC24.73■■□□□ 1.55
COL23A1Q86Y22 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
COL23A1Q86Y22 CR769767.2-201ENST00000622735 460 ntBASIC24.73■■□□□ 1.55
COL23A1Q86Y22 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
COL23A1Q86Y22 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.73■■□□□ 1.55
COL23A1Q86Y22 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL23A1Q86Y22 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
COL23A1Q86Y22 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL23A1Q86Y22 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC24.72■■□□□ 1.55
COL23A1Q86Y22 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC24.72■■□□□ 1.55
COL23A1Q86Y22 Z98882.1-201ENST00000622160 2253 ntBASIC24.72■■□□□ 1.55
COL23A1Q86Y22 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
COL23A1Q86Y22 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
COL23A1Q86Y22 UNC93B7-201ENST00000509439 705 ntBASIC24.72■■□□□ 1.55
COL23A1Q86Y22 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
COL23A1Q86Y22 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.72■■□□□ 1.55
COL23A1Q86Y22 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
COL23A1Q86Y22 AL024507.2-201ENST00000606070 2574 ntBASIC24.72■■□□□ 1.55
COL23A1Q86Y22 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL23A1Q86Y22 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.71■■□□□ 1.55
COL23A1Q86Y22 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.71■■□□□ 1.55
COL23A1Q86Y22 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL23A1Q86Y22 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
COL23A1Q86Y22 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC24.71■■□□□ 1.55
COL23A1Q86Y22 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC24.71■■□□□ 1.55
COL23A1Q86Y22 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC24.71■■□□□ 1.55
COL23A1Q86Y22 GCSHP2-201ENST00000560971 527 ntBASIC24.71■■□□□ 1.55
COL23A1Q86Y22 MIR3652-201ENST00000579335 131 ntBASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms