Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHFQ7M4L6 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.71■□□□□ 0.43
SHFQ7M4L6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.71■□□□□ 0.43
SHFQ7M4L6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.71■□□□□ 0.43
SHFQ7M4L6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.71■□□□□ 0.43
SHFQ7M4L6 AC137761.2-201ENST00000561729 223 ntBASIC17.71■□□□□ 0.43
SHFQ7M4L6 AC145350.3-201ENST00000569033 163 ntBASIC17.71■□□□□ 0.43
SHFQ7M4L6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SHFQ7M4L6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHFQ7M4L6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHFQ7M4L6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHFQ7M4L6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SHFQ7M4L6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHFQ7M4L6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHFQ7M4L6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHFQ7M4L6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHFQ7M4L6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHFQ7M4L6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.71■□□□□ 0.43
SHFQ7M4L6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SHFQ7M4L6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SHFQ7M4L6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
SHFQ7M4L6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
SHFQ7M4L6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
SHFQ7M4L6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.71■□□□□ 0.42
SHFQ7M4L6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHFQ7M4L6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.7■□□□□ 0.42
SHFQ7M4L6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.7■□□□□ 0.42
SHFQ7M4L6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHFQ7M4L6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHFQ7M4L6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHFQ7M4L6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHFQ7M4L6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SHFQ7M4L6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHFQ7M4L6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHFQ7M4L6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.7■□□□□ 0.42
SHFQ7M4L6 MCRIP2P1-201ENST00000394346 511 ntBASIC17.7■□□□□ 0.42
SHFQ7M4L6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.7■□□□□ 0.42
SHFQ7M4L6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.7■□□□□ 0.42
SHFQ7M4L6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SHFQ7M4L6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.7■□□□□ 0.42
SHFQ7M4L6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.7■□□□□ 0.42
SHFQ7M4L6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.7■□□□□ 0.42
SHFQ7M4L6 AC016405.3-201ENST00000607710 860 ntBASIC17.7■□□□□ 0.42
SHFQ7M4L6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHFQ7M4L6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.7■□□□□ 0.42
SHFQ7M4L6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHFQ7M4L6 KRT8P17-201ENST00000453110 1448 ntBASIC17.7■□□□□ 0.42
SHFQ7M4L6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHFQ7M4L6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.7■□□□□ 0.42
SHFQ7M4L6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SHFQ7M4L6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.7■□□□□ 0.42
SHFQ7M4L6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHFQ7M4L6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SHFQ7M4L6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.69■□□□□ 0.42
SHFQ7M4L6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SHFQ7M4L6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SHFQ7M4L6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.69■□□□□ 0.42
SHFQ7M4L6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.69■□□□□ 0.42
SHFQ7M4L6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SHFQ7M4L6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SHFQ7M4L6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHFQ7M4L6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SHFQ7M4L6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHFQ7M4L6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SHFQ7M4L6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHFQ7M4L6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHFQ7M4L6 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.68■□□□□ 0.42
SHFQ7M4L6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SHFQ7M4L6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHFQ7M4L6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.68■□□□□ 0.42
SHFQ7M4L6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.68■□□□□ 0.42
SHFQ7M4L6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
SHFQ7M4L6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.68■□□□□ 0.42
SHFQ7M4L6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHFQ7M4L6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SHFQ7M4L6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHFQ7M4L6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHFQ7M4L6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHFQ7M4L6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHFQ7M4L6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.68■□□□□ 0.42
SHFQ7M4L6 AC016769.1-201ENST00000409132 1010 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms