Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP1BQ7LBR1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 AC007225.1-201ENST00000566331 1836 ntBASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP1BQ7LBR1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 AC023632.3-201ENST00000521633 145 ntBASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 AC073648.6-201ENST00000641589 218 ntBASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CHMP1BQ7LBR1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 POM121L13P-201ENST00000422362 380 ntBASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 AC008403.3-201ENST00000598924 454 ntBASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CHMP1BQ7LBR1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms