Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.85■□□□□ 0.45
NIPAL3Q6P499 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NIPAL3Q6P499 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.85■□□□□ 0.45
NIPAL3Q6P499 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NIPAL3Q6P499 AC073210.2-201ENST00000430369 194 ntBASIC17.85■□□□□ 0.45
NIPAL3Q6P499 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NIPAL3Q6P499 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NIPAL3Q6P499 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NIPAL3Q6P499 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
NIPAL3Q6P499 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NIPAL3Q6P499 Z82202.1-201ENST00000623446 1880 ntBASIC17.85■□□□□ 0.45
NIPAL3Q6P499 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 MYC-209ENST00000641252 345 ntBASIC17.84■□□□□ 0.45
NIPAL3Q6P499 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NIPAL3Q6P499 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.83■□□□□ 0.45
NIPAL3Q6P499 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
NIPAL3Q6P499 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NIPAL3Q6P499 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NIPAL3Q6P499 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.83■□□□□ 0.44
NIPAL3Q6P499 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NIPAL3Q6P499 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NIPAL3Q6P499 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NIPAL3Q6P499 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.83■□□□□ 0.44
NIPAL3Q6P499 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.83■□□□□ 0.44
NIPAL3Q6P499 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.83■□□□□ 0.44
NIPAL3Q6P499 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NIPAL3Q6P499 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NIPAL3Q6P499 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NIPAL3Q6P499 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NIPAL3Q6P499 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NIPAL3Q6P499 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NIPAL3Q6P499 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NIPAL3Q6P499 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NIPAL3Q6P499 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 AC004408.2-201ENST00000623613 2777 ntBASIC17.82■□□□□ 0.44
NIPAL3Q6P499 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPAL3Q6P499 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.81■□□□□ 0.44
NIPAL3Q6P499 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms