Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 AC027702.1-201ENST00000563810 1770 ntBASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 AC073314.1-201ENST00000568729 2216 ntBASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 AL356309.3-201ENST00000624132 1934 ntBASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.9■□□□□ 0.46
TMEM53Q6P2H8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
TMEM53Q6P2H8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.89■□□□□ 0.46
TMEM53Q6P2H8 AC139713.2-201ENST00000641328 2723 ntBASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 MIR663A-201ENST00000385250 93 ntBASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 AC006970.2-201ENST00000450065 779 ntBASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM53Q6P2H8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM53Q6P2H8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM53Q6P2H8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TMEM53Q6P2H8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM53Q6P2H8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM53Q6P2H8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM53Q6P2H8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms