Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF43Q68DV7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF43Q68DV7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RNF43Q68DV7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF43Q68DV7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF43Q68DV7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RNF43Q68DV7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNF43Q68DV7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RNF43Q68DV7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF43Q68DV7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.58■□□□□ 0.88
RNF43Q68DV7 AL512408.1-201ENST00000569378 2000 ntBASIC20.58■□□□□ 0.88
RNF43Q68DV7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF43Q68DV7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF43Q68DV7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF43Q68DV7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF43Q68DV7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF43Q68DV7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF43Q68DV7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF43Q68DV7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF43Q68DV7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF43Q68DV7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF43Q68DV7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF43Q68DV7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF43Q68DV7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF43Q68DV7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
RNF43Q68DV7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF43Q68DV7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.57■□□□□ 0.88
RNF43Q68DV7 AL031963.3-201ENST00000606441 850 ntBASIC20.57■□□□□ 0.88
RNF43Q68DV7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF43Q68DV7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF43Q68DV7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF43Q68DV7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF43Q68DV7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF43Q68DV7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF43Q68DV7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
RNF43Q68DV7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF43Q68DV7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF43Q68DV7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF43Q68DV7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF43Q68DV7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RNF43Q68DV7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
RNF43Q68DV7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF43Q68DV7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF43Q68DV7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
RNF43Q68DV7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF43Q68DV7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RNF43Q68DV7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF43Q68DV7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RNF43Q68DV7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF43Q68DV7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
RNF43Q68DV7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF43Q68DV7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF43Q68DV7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF43Q68DV7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF43Q68DV7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF43Q68DV7 AC099778.1-201ENST00000568593 1911 ntBASIC20.56■□□□□ 0.88
RNF43Q68DV7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF43Q68DV7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF43Q68DV7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF43Q68DV7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF43Q68DV7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RNF43Q68DV7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RNF43Q68DV7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RNF43Q68DV7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF43Q68DV7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF43Q68DV7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF43Q68DV7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF43Q68DV7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RNF43Q68DV7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF43Q68DV7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF43Q68DV7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF43Q68DV7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF43Q68DV7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF43Q68DV7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF43Q68DV7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF43Q68DV7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF43Q68DV7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF43Q68DV7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RNF43Q68DV7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF43Q68DV7 AL121829.2-201ENST00000620908 328 ntBASIC20.55■□□□□ 0.88
RNF43Q68DV7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF43Q68DV7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF43Q68DV7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF43Q68DV7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF43Q68DV7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF43Q68DV7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF43Q68DV7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF43Q68DV7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF43Q68DV7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF43Q68DV7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF43Q68DV7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF43Q68DV7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF43Q68DV7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF43Q68DV7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF43Q68DV7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RNF43Q68DV7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF43Q68DV7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.54■□□□□ 0.88
RNF43Q68DV7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF43Q68DV7 AC124016.1-201ENST00000609552 612 ntBASIC20.54■□□□□ 0.88
RNF43Q68DV7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms