Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00242Q5T6M2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 KRT18P14-201ENST00000534205 1250 ntBASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 RALB-208ENST00000631312 311 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 MYCNOS-205ENST00000641950 531 ntBASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00242Q5T6M2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 HLA-G-202ENST00000376815 851 ntBASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 HLA-G-203ENST00000376818 1127 ntBASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 YBX1P1-201ENST00000445822 960 ntBASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 TERF1P5-201ENST00000477545 1207 ntBASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LINC00242Q5T6M2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 AL162412.1-201ENST00000567129 965 ntBASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00242Q5T6M2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms