Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 AC069236.1-201ENST00000604339 616 ntBASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RUNDC3AQ59EK9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
RUNDC3AQ59EK9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 CYP2T1P-201ENST00000432607 1285 ntBASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 AC011767.1-201ENST00000617410 1153 ntBASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RUNDC3AQ59EK9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 AL589743.5-201ENST00000616611 1050 ntBASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 MIR6821-201ENST00000617625 74 ntBASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 AL138781.2-201ENST00000617896 1843 ntBASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RUNDC3AQ59EK9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms