Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 AL121906.2-201ENST00000621597 723 ntBASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 AL032819.2-201ENST00000624543 2162 ntBASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RSPO1Q2MKA7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17■□□□□ 0.31
RSPO1Q2MKA7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17■□□□□ 0.31
RSPO1Q2MKA7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
RSPO1Q2MKA7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RSPO1Q2MKA7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RSPO1Q2MKA7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RSPO1Q2MKA7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17■□□□□ 0.31
RSPO1Q2MKA7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
RSPO1Q2MKA7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17■□□□□ 0.31
RSPO1Q2MKA7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17■□□□□ 0.31
RSPO1Q2MKA7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RSPO1Q2MKA7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17■□□□□ 0.31
RSPO1Q2MKA7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17■□□□□ 0.31
RSPO1Q2MKA7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17■□□□□ 0.31
RSPO1Q2MKA7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17■□□□□ 0.31
RSPO1Q2MKA7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RSPO1Q2MKA7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RSPO1Q2MKA7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17■□□□□ 0.31
RSPO1Q2MKA7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RSPO1Q2MKA7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RSPO1Q2MKA7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RSPO1Q2MKA7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RSPO1Q2MKA7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RSPO1Q2MKA7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17■□□□□ 0.31
RSPO1Q2MKA7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17■□□□□ 0.31
RSPO1Q2MKA7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 POM121L13P-201ENST00000422362 380 ntBASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 RNA5SP413-201ENST00000516373 109 ntBASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 AP006587.1-201ENST00000534129 1502 ntBASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.99■□□□□ 0.31
RSPO1Q2MKA7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RSPO1Q2MKA7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RSPO1Q2MKA7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RSPO1Q2MKA7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.98■□□□□ 0.31
RSPO1Q2MKA7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RSPO1Q2MKA7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.98■□□□□ 0.31
RSPO1Q2MKA7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RSPO1Q2MKA7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RSPO1Q2MKA7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RSPO1Q2MKA7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RSPO1Q2MKA7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RSPO1Q2MKA7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.98■□□□□ 0.31
RSPO1Q2MKA7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RSPO1Q2MKA7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.98■□□□□ 0.31
RSPO1Q2MKA7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms