Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH1Q08174 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH1Q08174 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH1Q08174 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDH1Q08174 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDH1Q08174 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDH1Q08174 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH1Q08174 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDH1Q08174 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDH1Q08174 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH1Q08174 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH1Q08174 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH1Q08174 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDH1Q08174 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH1Q08174 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDH1Q08174 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH1Q08174 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDH1Q08174 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH1Q08174 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDH1Q08174 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH1Q08174 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDH1Q08174 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH1Q08174 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH1Q08174 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH1Q08174 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDH1Q08174 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH1Q08174 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PCDH1Q08174 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH1Q08174 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH1Q08174 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDH1Q08174 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.93■□□□□ 0.62
PCDH1Q08174 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH1Q08174 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH1Q08174 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PCDH1Q08174 HLA-L-209ENST00000420110 1011 ntBASIC18.93■□□□□ 0.62
PCDH1Q08174 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH1Q08174 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH1Q08174 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH1Q08174 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH1Q08174 AL121829.2-201ENST00000620908 328 ntBASIC18.93■□□□□ 0.62
PCDH1Q08174 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH1Q08174 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH1Q08174 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH1Q08174 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDH1Q08174 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH1Q08174 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH1Q08174 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH1Q08174 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDH1Q08174 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDH1Q08174 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDH1Q08174 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PCDH1Q08174 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH1Q08174 AL121906.2-201ENST00000621597 723 ntBASIC18.92■□□□□ 0.62
PCDH1Q08174 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH1Q08174 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDH1Q08174 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH1Q08174 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH1Q08174 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PCDH1Q08174 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PCDH1Q08174 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH1Q08174 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH1Q08174 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDH1Q08174 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH1Q08174 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH1Q08174 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDH1Q08174 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDH1Q08174 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PCDH1Q08174 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDH1Q08174 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDH1Q08174 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDH1Q08174 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDH1Q08174 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PCDH1Q08174 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH1Q08174 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDH1Q08174 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH1Q08174 UNC93B4-201ENST00000505679 747 ntBASIC18.91■□□□□ 0.62
PCDH1Q08174 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH1Q08174 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDH1Q08174 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH1Q08174 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDH1Q08174 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PCDH1Q08174 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH1Q08174 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH1Q08174 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH1Q08174 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH1Q08174 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
PCDH1Q08174 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH1Q08174 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDH1Q08174 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
PCDH1Q08174 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH1Q08174 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PCDH1Q08174 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDH1Q08174 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH1Q08174 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH1Q08174 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH1Q08174 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDH1Q08174 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PCDH1Q08174 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH1Q08174 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH1Q08174 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms